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commit b1f8d6f5158e96cee6c29c69f57e4309b20ea264 Author: Sascha Steinbiss <[email protected]> Date: Fri Aug 5 19:13:24 2016 +0000 fix build on GCC6 --- debian/changelog | 7 +++++++ debian/patches/build_with_gcc6.patch | 17 +++++++++++++++++ debian/patches/series | 1 + 3 files changed, 25 insertions(+) diff --git a/debian/changelog b/debian/changelog index ee021e8..39ab232 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,10 @@ +trinityrnaseq (2.2.0+dfsg-2) unstable; urgency=medium + + * Team upload. + * Fix build on GCC 6 (Closes: #831110) + + -- Sascha Steinbiss <[email protected]> Fri, 05 Aug 2016 19:21:49 +0000 + trinityrnaseq (2.2.0+dfsg-1) unstable; urgency=medium [ Andreas Tille ] diff --git a/debian/patches/build_with_gcc6.patch b/debian/patches/build_with_gcc6.patch new file mode 100644 index 0000000..cb086f7 --- /dev/null +++ b/debian/patches/build_with_gcc6.patch @@ -0,0 +1,17 @@ +Description: fix building with GCC 6 + Upstream handles GCC versions separately in their Makefile + but didn't consider version 6. Cloning settings for GCC 5 to use + with GCC 6, works. +Author: Sascha Steinbiss <[email protected]> +--- a/Chrysalis/Makefile ++++ b/Chrysalis/Makefile +@@ -306,6 +306,9 @@ + ifeq ($(GPP_MAJOR_VERSION),5) + SYS_INCS = -iquote . $(XERCES_INC) + endif ++ ifeq ($(GPP_MAJOR_VERSION),6) ++ SYS_INCS = -iquote . $(XERCES_INC) ++ endif + endif + + # Linking control (e.g. to link templates): diff --git a/debian/patches/series b/debian/patches/series index 479b088..005dc7e 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -7,3 +7,4 @@ collections15-to-4 fix_system_paths disable-version-check adjust-trimmomatic-adapters-path +build_with_gcc6.patch -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/trinityrnaseq.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
