This is an automated email from the git hooks/post-receive script. cbk-guest pushed a commit to branch master in repository cd-hit.
commit e46e762d0e80bdfb45fe624f2ce622058bf23451 Author: cbk-guest <[email protected]> Date: Sun Aug 14 14:50:13 2016 +0300 Autopkgtest fixed --- debian/changelog | 7 +++++++ debian/tests/run-unit-test | 20 +++++++++++++++----- 2 files changed, 22 insertions(+), 5 deletions(-) diff --git a/debian/changelog b/debian/changelog index 831c850..ff0b0e3 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,10 @@ +cd-hit (4.6.6-3) UNRELEASED; urgency=medium + + * Team upload. + * Autopkgtest fixed + + -- Canberk Koç <[email protected]> Sun, 14 Aug 2016 14:49:02 +0300 + cd-hit (4.6.6-2) unstable; urgency=medium * Team upload diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test index 9744bb0..b5d62e3 100644 --- a/debian/tests/run-unit-test +++ b/debian/tests/run-unit-test @@ -13,11 +13,21 @@ cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP cd $AUTOPKGTEST_TMP find . -name "*.gz" -exec gunzip \{\} \; -echo "==== CD_HIT-PARA ====" -cd-hit-para -i example.fa -o db90 -c 0.9 -n 5 -M 16000 –d 0 -T 0 -echo "==== CD_HIT-2D-PARA ====" -cd-hit-2d-para -i example.fa -i2 example.fa -o db2novel -c 0.9 -n 5 -d 0 -M 16000 -T 0 -echo "==== cd-hit-div ====" +echo "==== CD_HIT ====" +cd-hit -i example.fa -o out -c 1.00 -n 5 -M 1000 -T 0 +echo "==== CD_HIT-2D ====" +cd-hit-2d -i example.fa -i2 example.fa -o out -c 0.9 -n 5 -M 1000 -T 0 +echo "==== CD_HIT-EST ====" +cd-hit-est -i example.fa -o out -c 0.95 -n 10 -M 1000 -T 0 +echo "==== CD_HIT-EST-2D ====" +cd-hit-est-2d -i example.fa -i2 example.fa -o out -c 0.95 -n 10 -M 1000 -T 0 +echo "==== CD_HIT-454 ====" +cd-hit-454 -i example.fa -o out -c 0.95 -n 10 -M 1000 -T 0 +echo "==== CD_HIT-DIV ====" cd-hit-div example.fa output 4 +for i in `ls ./*output*` ; do + echo $i + cat $i +done echo "PASS" -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/cd-hit.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
