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commit 1922e1a630d5be802a62a489067b9c40607267af Author: Sascha Steinbiss <[email protected]> Date: Mon Aug 15 14:16:10 2016 +0000 add build-time tests --- debian/control | 3 ++- debian/rules | 2 ++ debian/tests/example-tests | 8 +++++++- 3 files changed, 11 insertions(+), 2 deletions(-) diff --git a/debian/control b/debian/control index 6eb158a..2181a69 100644 --- a/debian/control +++ b/debian/control @@ -7,7 +7,8 @@ Priority: optional Build-Depends: debhelper (>= 9), recode, python, - asciidoctor + asciidoctor, + bowtie Standards-Version: 3.9.8 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/sspace.git Vcs-Git: https://anonscm.debian.org/git/debian-med/sspace.git diff --git a/debian/rules b/debian/rules index 424f9aa..176f41d 100755 --- a/debian/rules +++ b/debian/rules @@ -15,6 +15,8 @@ override_dh_install: chmod -x debian/sspace/usr/share/sspace/tools/TRIMMING_PAIRED_READS.README \ debian/sspace/usr/share/sspace/tools/TQS.readme \ debian/sspace/usr/share/sspace/dotlib/DotLib.pm +override_dh_auto_test: + debian/tests/example-tests $(PWD)/SSPACE_Basic.pl override_dh_installexamples: dh_installexamples diff --git a/debian/tests/example-tests b/debian/tests/example-tests index b1a35a8..2c112f6 100755 --- a/debian/tests/example-tests +++ b/debian/tests/example-tests @@ -11,7 +11,13 @@ cd $WORKDIR cp $ORIGDIR/example/* . cp $ORIGDIR/debian/tests/SRR* . -sspace -l libraries.txt -s contigs_abyss.fasta +if [ -n "$1" ]; then + CMD=$1; +else + CMD=sspace +fi + +$CMD -l libraries.txt -s contigs_abyss.fasta [ -s standard_output.final.evidence ] [ -s standard_output.final.scaffolds.fasta ] -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/sspace.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
