This is an automated email from the git hooks/post-receive script. malex-guest pushed a commit to branch master in repository gmap.
commit 400bcb0b54d725f577d15ac190b8df026b1192a8 Merge: befbcc6 2deaf4f Author: Alexandre Mestiashvili <[email protected]> Date: Wed Aug 17 15:51:39 2016 +0200 Merge tag 'upstream/2016-08-16' Upstream version 2016-08-16 ChangeLog | 109 +- Makefile.in | 11 +- README | 31 +- TODO | 3 + VERSION | 2 +- aclocal.m4 | 36 + configure | 85 +- configure.ac | 15 +- src/ChangeLog | 0 src/Makefile.am | 32 +- src/Makefile.in | 45 +- src/atoi.c | 2 +- src/bytecoding.c | 18 +- src/cmet.c | 2 +- src/comp.h | 2 +- src/compile | 165 +++ src/filestring.c | 2 +- src/genome_sites.c | 2 +- src/gmap.c | 21 +- src/gsnap.c | 19 +- src/indel.c | 120 +- src/mapq.c | 21 +- src/pair.c | 20 +- src/pair.h | 4 +- src/pairpool.c | 2 +- src/samprint.c | 22 +- src/sarray-read.c | 502 +++++--- src/sedgesort.c | 2 +- src/sedgesort.h | 2 +- src/shortread.c | 28 +- src/splice.c | 895 +++----------- src/stage1hr.c | 2893 ++++++++++++++++---------------------------- src/stage1hr.h | 5 +- src/stage3.c | 19 +- src/stage3hr.c | 207 ++-- src/stage3hr.h | 2 +- src/substring.c | 1220 +++++++++++++------ src/substring.h | 76 +- src/uniqscan.c | 15 +- src/univdiag.h | 2 +- tests/Makefile.in | 9 +- util/Makefile.in | 9 +- util/gtf_genes.pl.in | 24 +- util/gtf_introns.pl.in | 2 +- util/gtf_splicesites.pl.in | 2 +- 45 files changed, 3284 insertions(+), 3421 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/gmap.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
