This is an automated email from the git hooks/post-receive script. daube-guest pushed a commit to branch master in repository python-cutadapt.
commit 0ba091747b8b721baa32b2be0642988ec8009f15 Merge: a148fa4 89cb1e6 Author: Kevin Murray <kdmf...@gmail.com> Date: Fri Dec 2 13:56:23 2016 +1100 Merge tag 'upstream/1.12' Upstream version 1.12 CHANGES.rst | 11 +++ PKG-INFO | 45 ++++++++- README.rst | 2 +- bin/_preamble.py | 21 ----- bin/cutadapt | 10 -- cutadapt.egg-info/PKG-INFO | 45 ++++++++- cutadapt.egg-info/SOURCES.txt | 8 +- cutadapt.egg-info/entry_points.txt | 3 + cutadapt.egg-info/requires.txt | 1 + cutadapt/_align.c | 36 +++++--- cutadapt/_seqio.c | 2 +- cutadapt/_seqio.pyx | 2 +- cutadapt/_version.py | 4 +- cutadapt/adapters.py | 12 +-- cutadapt/filters.py | 2 +- cutadapt/modifiers.py | 9 ++ cutadapt/scripts/cutadapt.py | 115 ++++++++++++----------- cutadapt/seqio.py | 4 +- cutadapt/xopen.py | 182 ------------------------------------- doc/colorspace.rst | 26 +++++- doc/guide.rst | 157 +++++++++++++++++++++----------- doc/recipes.rst | 48 +++++++--- setup.py | 7 +- tests/cut/shortened.fastq | 12 +++ tests/cut/small-no-trim.fasta | 6 ++ tests/testmodifiers.py | 19 +++- tests/tests.py | 8 ++ tests/testxopen.py | 101 -------------------- 28 files changed, 422 insertions(+), 476 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-cutadapt.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit