This is an automated email from the git hooks/post-receive script. afif pushed a commit to branch master in repository dazzdb.
commit 126b62b39e8c468c924044cfdc728d657e9f52d5 Author: Afif Elghraoui <[email protected]> Date: Wed Jan 18 22:34:58 2017 -0800 Refresh and update patches --- debian/patches/append-cflags.patch | 2 +- debian/patches/compiler-flags.patch | 22 +++++++++++++++------- debian/patches/destdir.patch | 2 +- 3 files changed, 17 insertions(+), 9 deletions(-) diff --git a/debian/patches/append-cflags.patch b/debian/patches/append-cflags.patch index d4b7fa8..fa89723 100644 --- a/debian/patches/append-cflags.patch +++ b/debian/patches/append-cflags.patch @@ -11,4 +11,4 @@ Last-Update: 2015-09-13 +CFLAGS += -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing ALL = fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm simulator \ - fasta2DAM DAM2fasta DBdump rangen + fasta2DAM DAM2fasta DBdump rangen arrow2DB DB2arrow DBwipe diff --git a/debian/patches/compiler-flags.patch b/debian/patches/compiler-flags.patch index 028ba2b..208f40f 100644 --- a/debian/patches/compiler-flags.patch +++ b/debian/patches/compiler-flags.patch @@ -1,18 +1,18 @@ Description: Honor LDFLAGS in upstream Makefile -Author: Afif Elghraoui <[email protected]> +Author: Afif Elghraoui <[email protected]> Forwarded: no -Last-Update: 2015-09-13 +Last-Update: 2017-01-18 --- dazzdb.orig/Makefile +++ dazzdb/Makefile @@ -1,6 +1,7 @@ DEST_DIR = ~/bin CFLAGS += -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -+LDLIBS += -lm ++LDLIBS = -lm ALL = fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm simulator \ - fasta2DAM DAM2fasta DBdump rangen -@@ -8,49 +9,35 @@ + fasta2DAM DAM2fasta DBdump rangen arrow2DB DB2arrow DBwipe +@@ -8,55 +9,41 @@ all: $(ALL) fasta2DB: fasta2DB.c DB.c DB.h QV.c QV.h @@ -28,6 +28,14 @@ Last-Update: 2015-09-13 DB2quiva: DB2quiva.c DB.c DB.h QV.c QV.h - gcc $(CFLAGS) -o DB2quiva DB2quiva.c DB.c QV.c -lm ++DB2arrow: LDLIBS = -lz + DB2arrow: DB2arrow.c DB.c QV.c DB.h QV.h +- gcc $(CFLAGS) -o DB2arrow DB2arrow.c DB.c QV.c -lz + ++arrow2DB: LDLIBS = -lz + arrow2DB: arrow2DB.c DB.c QV.c DB.h QV.h +- gcc $(CFLAGS) -o arrow2DB arrow2DB.c DB.c QV.c -lz + DBsplit: DBsplit.c DB.c DB.h QV.c QV.h - gcc $(CFLAGS) -o DBsplit DBsplit.c DB.c QV.c -lm @@ -61,5 +69,5 @@ Last-Update: 2015-09-13 DAM2fasta: DAM2fasta.c DB.c DB.h QV.c QV.h - gcc $(CFLAGS) -o DAM2fasta DAM2fasta.c DB.c QV.c -lm - clean: - rm -f $(ALL) + DBwipe: DBwipe.c DB.c DB.h QV.c QV.h + gcc $(CFLAGS) -o DBwipe DBwipe.c DB.c QV.c -lm diff --git a/debian/patches/destdir.patch b/debian/patches/destdir.patch index 33f7e27..0a5fe3a 100644 --- a/debian/patches/destdir.patch +++ b/debian/patches/destdir.patch @@ -5,7 +5,7 @@ Forwarded: no Last-Update: 2015-09-13 --- dazzdb.orig/Makefile +++ dazzdb/Makefile -@@ -45,7 +45,8 @@ +@@ -55,7 +55,8 @@ rm -f dazz.db.tar.gz install: -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/dazzdb.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
