Author: ginggs Date: 2017-06-13 10:40:37 +0000 (Tue, 13 Jun 2017) New Revision: 23825
Added: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/changelog trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/control trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/copyright trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/tests/control Removed: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/changelog trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/control trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/copyright trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/tests/control Log: Tagged 0.2.7-1 Deleted: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/changelog =================================================================== --- trunk/packages/R/r-bioc-delayedarray/trunk/debian/changelog 2017-06-10 05:29:42 UTC (rev 23821) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/changelog 2017-06-13 10:40:37 UTC (rev 23825) @@ -1,5 +0,0 @@ -r-bioc-delayedarray (0.2.4-1) unstable; urgency=medium - - * Initial release (Closes: #863415) - - -- Graham Inggs <[email protected]> Fri, 26 May 2017 17:15:55 +0200 Copied: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/changelog (from rev 23824, trunk/packages/R/r-bioc-delayedarray/trunk/debian/changelog) =================================================================== --- trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/changelog (rev 0) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/changelog 2017-06-13 10:40:37 UTC (rev 23825) @@ -0,0 +1,14 @@ +r-bioc-delayedarray (0.2.7-1) unstable; urgency=medium + + * New upstream version + * Update Build-Depends: r-bioc-s4vectors (>= 0.14.3) + * Add missing dependency for autopkgtest: r-cran-runit + * Add copyright year to debian/copyright + + -- Graham Inggs <[email protected]> Tue, 13 Jun 2017 11:34:56 +0200 + +r-bioc-delayedarray (0.2.4-1) unstable; urgency=medium + + * Initial release (Closes: #863415) + + -- Graham Inggs <[email protected]> Fri, 26 May 2017 17:15:55 +0200 Deleted: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/control =================================================================== --- trunk/packages/R/r-bioc-delayedarray/trunk/debian/control 2017-06-10 05:29:42 UTC (rev 23821) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/control 2017-06-13 10:40:37 UTC (rev 23825) @@ -1,31 +0,0 @@ -Source: r-bioc-delayedarray -Section: gnu-r -Priority: optional -Maintainer: Debian Med Packaging Team <[email protected]> -Uploaders: Graham Inggs <[email protected]> -Build-Depends: debhelper (>= 10), - dh-r, - r-base-dev, - r-bioc-biocgenerics, - r-bioc-iranges, - r-bioc-s4vectors, - r-cran-matrixstats -Standards-Version: 3.9.8 -Homepage: https://bioconductor.org/packages/DelayedArray/ -Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-delayedarray/trunk/ -Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-delayedarray/trunk/ - -Package: r-bioc-delayedarray -Architecture: all -Depends: ${R:Depends}, ${misc:Depends}, ${shlibs:Depends} -Recommends: ${R:Recommends} -Suggests: ${R:Suggests} -Description: BioConductor delayed operations on array-like objects - Wrapping an array-like object (typically an on-disk object) in - a DelayedArray object allows one to perform common array operations - on it without loading the object in memory. In order to reduce memory - usage and optimize performance, operations on the object are either - delayed or executed using a block processing mechanism. Note that this - also works on in-memory array-like objects like DataFrame objects - (typically with Rle columns), Matrix objects, and ordinary arrays and - data frames. Copied: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/control (from rev 23824, trunk/packages/R/r-bioc-delayedarray/trunk/debian/control) =================================================================== --- trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/control (rev 0) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/control 2017-06-13 10:40:37 UTC (rev 23825) @@ -0,0 +1,31 @@ +Source: r-bioc-delayedarray +Section: gnu-r +Priority: optional +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Graham Inggs <[email protected]> +Build-Depends: debhelper (>= 10), + dh-r, + r-base-dev, + r-bioc-biocgenerics, + r-bioc-iranges, + r-bioc-s4vectors (>= 0.14.3), + r-cran-matrixstats +Standards-Version: 3.9.8 +Homepage: https://bioconductor.org/packages/DelayedArray/ +Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-delayedarray/trunk/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-delayedarray/trunk/ + +Package: r-bioc-delayedarray +Architecture: all +Depends: ${R:Depends}, ${misc:Depends}, ${shlibs:Depends} +Recommends: ${R:Recommends} +Suggests: ${R:Suggests} +Description: BioConductor delayed operations on array-like objects + Wrapping an array-like object (typically an on-disk object) in + a DelayedArray object allows one to perform common array operations + on it without loading the object in memory. In order to reduce memory + usage and optimize performance, operations on the object are either + delayed or executed using a block processing mechanism. Note that this + also works on in-memory array-like objects like DataFrame objects + (typically with Rle columns), Matrix objects, and ordinary arrays and + data frames. Deleted: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/copyright =================================================================== --- trunk/packages/R/r-bioc-delayedarray/trunk/debian/copyright 2017-06-10 05:29:42 UTC (rev 23821) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/copyright 2017-06-13 10:40:37 UTC (rev 23825) @@ -1,106 +0,0 @@ -Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ -Upstream-Name: DelayedArray -Upstream-Contact: Hervé Pagès <[email protected]> -Source: https://bioconductor.org/packages/DelayedArray/ - -Files: * -Copyright: Hervé Pagès <[email protected]> -License: Artistic-2.0 - -Files: debian/* -Copyright: 2017 Graham Inggs <[email protected]> -License: Artistic-2.0 - -License: Artistic-2.0 - The "Artistic License" - . - Preamble - . - 1. You may make and give away verbatim copies of the source form of the - Standard Version of this Package without restriction, provided that - you duplicate all of the original copyright notices and associated - disclaimers. - . - 2. You may apply bug fixes, portability fixes and other modifications - derived from the Public Domain or from the Copyright Holder. A - Package modified in such a way shall still be considered the Standard - Version. - . - 3. You may otherwise modify your copy of this Package in any way, - provided that you insert a prominent notice in each changed file stating - how and when you changed that file, and provided that you do at least - ONE of the following: - . - a) place your modifications in the Public Domain or otherwise make them - Freely Available, such as by posting said modifications to Usenet or - an equivalent medium, or placing the modifications on a major archive - site such as uunet.uu.net, or by allowing the Copyright Holder to include - your modifications in the Standard Version of the Package. - . - b) use the modified Package only within your corporation or organization. - . - c) rename any non-standard executables so the names do not conflict - with standard executables, which must also be provided, and provide - a separate manual page for each non-standard executable that clearly - documents how it differs from the Standard Version. - . - d) make other distribution arrangements with the Copyright Holder. - . - 4. You may distribute the programs of this Package in object code or - executable form, provided that you do at least ONE of the following: - . - a) distribute a Standard Version of the executables and library files, - together with instructions (in the manual page or equivalent) on where - to get the Standard Version. - . - b) accompany the distribution with the machine-readable source of - the Package with your modifications. - . - c) give non-standard executables non-standard names, and clearly - document the differences in manual pages (or equivalent), together - with instructions on where to get the Standard Version. - . - d) make other distribution arrangements with the Copyright Holder. - . - 5. You may charge a reasonable copying fee for any distribution of this - Package. You may charge any fee you choose for support of this Package. - You may not charge a fee for this Package itself. However, you may - distribute this Package in aggregate with other (possibly commercial) - programs as part of a larger (possibly commercial) software distribution - provided that you do not advertise this Package as a product of your - own. You may embed this Package's interpreter within an executable of - yours (by linking); this shall be construed as a mere form of - aggregation, provided that the complete Standard Version of the - interpreter is so embedded. - . - 6. The scripts and library files supplied as input to or produced as - output from the programs of this Package do not automatically fall under - the copyright of this Package, but belong to whoever generated them, and - may be sold commercially, and may be aggregated with this Package. If - such scripts or library files are aggregated with this Package via the - so-called "undump" or "unexec" methods of producing a binary executable - image, then distribution of such an image shall neither be construed as - a distribution of this Package nor shall it fall under the restrictions - of Paragraphs 3 and 4, provided that you do not represent such an - executable image as a Standard Version of this Package. - . - 7. C subroutines (or comparably compiled subroutines in other - languages) supplied by you and linked into this Package in order to - emulate subroutines and variables of the language defined by this - Package shall not be considered part of this Package, but are the - equivalent of input as in Paragraph 6, provided these subroutines do - not change the language in any way that would cause it to fail the - regression tests for the language. - . - 8. Aggregation of this Package with a commercial distribution is always - permitted provided that the use of this Package is embedded; that is, - when no overt attempt is made to make this Package's interfaces visible - to the end user of the commercial distribution. Such use shall not be - construed as a distribution of this Package. - . - 9. The name of the Copyright Holder may not be used to endorse or promote - products derived from this software without specific prior written permission. - . - 10. THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR - IMPLIED WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED - WARRANTIES OF MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE. Copied: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/copyright (from rev 23824, trunk/packages/R/r-bioc-delayedarray/trunk/debian/copyright) =================================================================== --- trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/copyright (rev 0) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/copyright 2017-06-13 10:40:37 UTC (rev 23825) @@ -0,0 +1,106 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: DelayedArray +Upstream-Contact: Hervé Pagès <[email protected]> +Source: https://bioconductor.org/packages/DelayedArray/ + +Files: * +Copyright: 2017 Hervé Pagès <[email protected]> +License: Artistic-2.0 + +Files: debian/* +Copyright: 2017 Graham Inggs <[email protected]> +License: Artistic-2.0 + +License: Artistic-2.0 + The "Artistic License" + . + Preamble + . + 1. You may make and give away verbatim copies of the source form of the + Standard Version of this Package without restriction, provided that + you duplicate all of the original copyright notices and associated + disclaimers. + . + 2. You may apply bug fixes, portability fixes and other modifications + derived from the Public Domain or from the Copyright Holder. A + Package modified in such a way shall still be considered the Standard + Version. + . + 3. You may otherwise modify your copy of this Package in any way, + provided that you insert a prominent notice in each changed file stating + how and when you changed that file, and provided that you do at least + ONE of the following: + . + a) place your modifications in the Public Domain or otherwise make them + Freely Available, such as by posting said modifications to Usenet or + an equivalent medium, or placing the modifications on a major archive + site such as uunet.uu.net, or by allowing the Copyright Holder to include + your modifications in the Standard Version of the Package. + . + b) use the modified Package only within your corporation or organization. + . + c) rename any non-standard executables so the names do not conflict + with standard executables, which must also be provided, and provide + a separate manual page for each non-standard executable that clearly + documents how it differs from the Standard Version. + . + d) make other distribution arrangements with the Copyright Holder. + . + 4. You may distribute the programs of this Package in object code or + executable form, provided that you do at least ONE of the following: + . + a) distribute a Standard Version of the executables and library files, + together with instructions (in the manual page or equivalent) on where + to get the Standard Version. + . + b) accompany the distribution with the machine-readable source of + the Package with your modifications. + . + c) give non-standard executables non-standard names, and clearly + document the differences in manual pages (or equivalent), together + with instructions on where to get the Standard Version. + . + d) make other distribution arrangements with the Copyright Holder. + . + 5. You may charge a reasonable copying fee for any distribution of this + Package. You may charge any fee you choose for support of this Package. + You may not charge a fee for this Package itself. However, you may + distribute this Package in aggregate with other (possibly commercial) + programs as part of a larger (possibly commercial) software distribution + provided that you do not advertise this Package as a product of your + own. You may embed this Package's interpreter within an executable of + yours (by linking); this shall be construed as a mere form of + aggregation, provided that the complete Standard Version of the + interpreter is so embedded. + . + 6. The scripts and library files supplied as input to or produced as + output from the programs of this Package do not automatically fall under + the copyright of this Package, but belong to whoever generated them, and + may be sold commercially, and may be aggregated with this Package. If + such scripts or library files are aggregated with this Package via the + so-called "undump" or "unexec" methods of producing a binary executable + image, then distribution of such an image shall neither be construed as + a distribution of this Package nor shall it fall under the restrictions + of Paragraphs 3 and 4, provided that you do not represent such an + executable image as a Standard Version of this Package. + . + 7. C subroutines (or comparably compiled subroutines in other + languages) supplied by you and linked into this Package in order to + emulate subroutines and variables of the language defined by this + Package shall not be considered part of this Package, but are the + equivalent of input as in Paragraph 6, provided these subroutines do + not change the language in any way that would cause it to fail the + regression tests for the language. + . + 8. Aggregation of this Package with a commercial distribution is always + permitted provided that the use of this Package is embedded; that is, + when no overt attempt is made to make this Package's interfaces visible + to the end user of the commercial distribution. Such use shall not be + construed as a distribution of this Package. + . + 9. The name of the Copyright Holder may not be used to endorse or promote + products derived from this software without specific prior written permission. + . + 10. THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR + IMPLIED WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED + WARRANTIES OF MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE. Deleted: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/tests/control =================================================================== --- trunk/packages/R/r-bioc-delayedarray/trunk/debian/tests/control 2017-06-10 05:29:42 UTC (rev 23821) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/tests/control 2017-06-13 10:40:37 UTC (rev 23825) @@ -1,3 +0,0 @@ -Tests: bioc -Depends: @, r-bioc-biocgenerics, r-bioc-genefilter -Restrictions: allow-stderr Copied: trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/tests/control (from rev 23824, trunk/packages/R/r-bioc-delayedarray/trunk/debian/tests/control) =================================================================== --- trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/tests/control (rev 0) +++ trunk/packages/R/r-bioc-delayedarray/tags/0.2.7-1/tests/control 2017-06-13 10:40:37 UTC (rev 23825) @@ -0,0 +1,3 @@ +Tests: bioc +Depends: @, r-cran-runit, r-bioc-biocgenerics, r-bioc-genefilter +Restrictions: allow-stderr _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
