This is an automated email from the git hooks/post-receive script. tille pushed a commit to tag debian/0.4.0-3 in repository perm.
commit 8b3e49da01d84b43614aff8c9083cdf7e5dd1e81 Author: Andreas Tille <[email protected]> Date: Mon Aug 21 10:05:36 2017 +0200 Fix gcc7 issue --- debian/changelog | 7 +++++++ debian/patches/gcc7.patch | 25 +++++++++++++++++++++++++ debian/patches/series | 1 + 3 files changed, 33 insertions(+) diff --git a/debian/changelog b/debian/changelog index 42732e3..fb6a753 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,10 @@ +perm (0.4.0-3) UNRELEASED; urgency=medium + + * Fix gcc7 issue + Closes: #853609 + + -- Andreas Tille <[email protected]> Mon, 21 Aug 2017 10:03:55 +0200 + perm (0.4.0-2) unstable; urgency=medium * Moved packaging to Git since source code vanished otherwise and diff --git a/debian/patches/gcc7.patch b/debian/patches/gcc7.patch new file mode 100644 index 0000000..08d4994 --- /dev/null +++ b/debian/patches/gcc7.patch @@ -0,0 +1,25 @@ +Author: Andreas Tille <[email protected]> +Last-Update: Mon, 21 Aug 2017 10:03:55 +0200 +Bug-Debian: https://bugs.debian.org/853609 +Description: Fix gcc7 issue + +--- a/MappingResult.h ++++ b/MappingResult.h +@@ -262,7 +262,7 @@ inline bool printAPairedMappingInPerM\ + int totalMis = mis1 + mis2; + + if(m1.caRef[0] == '\0' || m2.caRef[0] == '\0') { +- if(m1.QScores == '\0' || m2.QScores == '\0') { ++ if(m1.QScores == (char *)'\0' || m2.QScores == (char *)'\0') { + sprintf(AlignResult->caBufp, "%s\t%s\t%s\t%d\t%d\t%d\t%s\t%s\t%u\t%u\t%c\t%c\t%d\n", + m1.QNAME, m1.caRead, m2.caRead, mis1, mis2, + totalMis, m1.RNAME, m2.RNAME, m1.uiPOS, m2.uiPOS, m1.strand, m2.strand, mappedPairedNo); +@@ -272,7 +272,7 @@ inline bool printAPairedMappingInPerM\ + totalMis, m1.RNAME, m2.RNAME, m1.uiPOS, m2.uiPOS, m1.strand, m2.strand, mappedPairedNo); + } + } else { +- if(m1.QScores == '\0' || m2.QScores == '\0') { ++ if(m1.QScores == (char *)'\0' || m2.QScores == (char *)'\0') { + sprintf(AlignResult->caBufp, "%s\t%s\t%s\t%d\t%d\t%d\t%s\t%s\t%u\t%u\t%c\t%c\t%d\t%s\t%s\n", + m1.QNAME, m1.caRead, m2.caRead, mis1, mis2, + totalMis, m1.RNAME, m2.RNAME, m1.uiPOS, m2.uiPOS, m1.strand, m2.strand, mappedPairedNo, m1.caRef, m2.caRef); diff --git a/debian/patches/series b/debian/patches/series index 801a8a3..ab32561 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -1,3 +1,4 @@ make_dynamic_executable.patch hardening.patch spelling.patch +gcc7.patch -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/perm.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
