This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-cran-seqinr.
commit ad6e339aaf9e77e1fad73db511bf74d834e92694 Author: Andreas Tille <ti...@debian.org> Date: Tue May 12 12:52:03 2015 +0000 Add packaging for seqinr --- debian/changelog | 5 +++++ debian/compat | 1 + debian/control | 22 ++++++++++++++++++++++ debian/copyright | 27 +++++++++++++++++++++++++++ debian/rules | 3 +++ debian/source/format | 1 + debian/upstream/metadata | 9 +++++++++ debian/watch | 2 ++ 8 files changed, 70 insertions(+) diff --git a/debian/changelog b/debian/changelog new file mode 100644 index 0000000..858035b --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +r-cran-seqinr (3.1-3-1) UNRELEASED; urgency=medium + + * Initial upload (Closes: #???) + + -- Andreas Tille <ti...@debian.org> Sat, 09 May 2015 08:52:18 +0200 diff --git a/debian/compat b/debian/compat new file mode 100644 index 0000000..ec63514 --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +9 diff --git a/debian/control b/debian/control new file mode 100644 index 0000000..1057bbc --- /dev/null +++ b/debian/control @@ -0,0 +1,22 @@ +Source: r-cran-seqinr +Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> +Uploaders: Andreas Tille <ti...@debian.org>, +Section: gnu-r +Priority: optional +Build-Depends: debhelper (>= 9), + cdbs, + r-base-dev +Standards-Version: 3.9.6 +Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-seqinr/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-seqinr/ +Homepage: http://cran.r-project.org/web/packages/seqinr + +Package: r-cran-seqinr +Architecture: any +Depends: ${shlibs:Depends}, + ${misc:Depends}, + ${R:Depends} +Description: GNU R Biological Sequences Retrieval and Analysis + Exploratory data analysis and data visualization for biological sequence + (DNA and protein) data. Includes also utilities for sequence data + management under the ACNUC system. diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 0000000..329a95b --- /dev/null +++ b/debian/copyright @@ -0,0 +1,27 @@ +Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Contact: Simon Penel <simon.pe...@univ-lyon1.fr> +Upstream-Name: seqinr +Source: http://cran.r-project.org/web/packages/seqinr/ + +Files: * +Copyright: 2007-2014 Delphine Charif, Jean R. Lobry, Anamaria Necsulea, + Leonor Palmeira, Simon Penel, Guy Perriere +License: GPL-2+ + +Files: debian/* +Copyright: 2015 Andreas Tille <ti...@debian.org> +License: GPL-2+ + +License: GPL-2+ + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; either version 2 of the License, or + (at your option) any later version. + . + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + . + On Debian systems, the complete text of the GNU General Public License + version 2 can be found in ‘/usr/share/common-licenses/GPL-2’. diff --git a/debian/rules b/debian/rules new file mode 100755 index 0000000..2fbba2d --- /dev/null +++ b/debian/rules @@ -0,0 +1,3 @@ +#!/usr/bin/make -f + +include /usr/share/R/debian/r-cran.mk diff --git a/debian/source/format b/debian/source/format new file mode 100644 index 0000000..163aaf8 --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/debian/upstream/metadata b/debian/upstream/metadata new file mode 100644 index 0000000..de4ab13 --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,9 @@ +Reference: + Author: Delphine Charif and Jean R. Lobry + Title: "SeqinR 1.0-2: a contributed package to the R project for statistical computing devoted to biological sequences retrieval and analysis" + Booktitle: "Structural approaches to sequence evolution: Molecules, networks, populations" + Editor: Ugo Bastolla and Markus Porto and H. Eduardo Roman and Michele Vendruscolo + ISBN: 978-3-540-35305-8 + Year: 2007 + Pages: 207-232 + URL: http://link.springer.com/book/10.1007%2F978-3-540-35306-5 diff --git a/debian/watch b/debian/watch new file mode 100644 index 0000000..c2e660b --- /dev/null +++ b/debian/watch @@ -0,0 +1,2 @@ +version=3 +http://cran.r-project.org/src/contrib/seqinr_([\d.-]*)\.tar.gz -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-cran-seqinr.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit