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commit 08ff753ac31558770964d596d9d65d0e9cf09080 Author: Afif Elghraoui <[email protected]> Date: Wed Oct 11 23:33:07 2017 -0400 Revise autopkgtest to avoid unnecessary patching of upstream source --- debian/patches/series | 1 - debian/patches/vpath.patch | 21 --------------------- debian/tests/control | 2 +- 3 files changed, 1 insertion(+), 23 deletions(-) diff --git a/debian/patches/series b/debian/patches/series index 81052c2..da8b790 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -1,2 +1 @@ rpath.patch -vpath.patch diff --git a/debian/patches/vpath.patch b/debian/patches/vpath.patch deleted file mode 100644 index 27024bf..0000000 --- a/debian/patches/vpath.patch +++ /dev/null @@ -1,21 +0,0 @@ -Description: Use VPATH to set prerequisites of fast5 headers - This makes it possible to change the location of the headers while - still keeping them as prerequisites in the Makefile. -Author: Afif Elghraoui <[email protected]> -Forwarded: no -Last-Update: 2017-10-06 ---- fast5.orig/src/Makefile -+++ fast5/src/Makefile -@@ -19,9 +19,11 @@ - HPPTOOLS_DIR ?= hpptools - FAST5_DIR ?= ${CURDIR}/../include - -+VPATH += ${FAST5_DIR} -+ - TARGETS = f5ls f5ls-full hdf5-mod f5-mod - EXTRA_TARGETS = f5dump f5pack --HPP_FILES := $(addprefix ${FAST5_DIR}/, fast5.hpp fast5/hdf5_tools.hpp fast5/Huffman_Packer.hpp fast5/Bit_Packer.hpp) -+HPP_FILES := fast5.hpp fast5/hdf5_tools.hpp fast5/Huffman_Packer.hpp fast5/Bit_Packer.hpp - - CXXFLAGS := -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic - CPPFLAGS := -isystem ${HDF5_INCLUDE_DIR} -I $(FAST5_DIR) diff --git a/debian/tests/control b/debian/tests/control index 474a4b3..35e925b 100644 --- a/debian/tests/control +++ b/debian/tests/control @@ -1,7 +1,7 @@ Test-Command: cp /usr/share/doc/libfast5-dev/examples/* $ADTTMP && cd $ADTTMP - && make VPATH=/usr/include + && make FAST5_DIR=/usr/include HDF5_INCLUDE_DIR=/usr/include/hdf5/serial HDF5_LIB_DIR=/usr/lib/$(gcc -print-multiarch)/hdf5/serial Depends: -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/fast5.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
