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commit d6586bee8101ed14596422e8ca2b20964d6199c3
Author: Tim Booth <tbo...@ceh.ac.uk>
Date: Fri Apr 11 08:57:40 2014 +0000
Tidy up my ramblings a bit in README.source.
---
debian/README.source | 35 ++++++++++-------------------------
1 file changed, 10 insertions(+), 25 deletions(-)
diff --git a/debian/README.source b/debian/README.source
index 92bcb00..38f3b93 100644
--- a/debian/README.source
+++ b/debian/README.source
@@ -1,17 +1,14 @@
-Where did I get to with packaging Acacia??
+Acacia ships as a single JAR with dependencies packaed inside using
+org/eclipse/jdt/internal/jarinjarloader. We will not be using this in Debian.
-I was working my way through the deps, and I had some files scattered
somewhere. Where are they??
-Ah yes - hidden as a draft e-mail, of course! Here you go:
-
-
-org/eclipse/jdt/internal/jarinjarloader - not needed as we'll not
-package like that
+Here's what's in the JAR and my notes;
# biojava.jar (?version unknown?)
- # biojava-1.7.1-all.jar = libbiojava1.7
+ # biojava-1.7.1-all.jar = libbiojava1.7 - already in Debian
# classmexer-0_03.zip (a red herring? maybe only needed for testing)
# colt.jar =
http://acs.lbl.gov/software/colt/colt-download/releases/colt-1.2.0.tar.gz
+Already in Debian but non-free.
# optimization.jar = http://www1.fpl.fs.fed.us/optimization.html (or
the newer version??)
# Blas.jar = http://www1.fpl.fs.fed.us/Blas_f77.html, but already in
optimization.jar
@@ -31,25 +28,13 @@ the newer version??)
# commons-math-2.1.jar = libcommons-math-java
Also, SSJ might or might not need libdsol1-xml-java which in turn is a
-PITA. See readme.tim in libdsol1-xml-java.
-
-SSJ definitely does need colt, so let's package colt before going any further.
-Ah - Andreas already started:
-http://svn.debian.org/wsvn/debian-med/trunk/packages/libcolt-java/trunk/
-
-Need to talk to the Java guys and see who is packaging what, and to look
-for any ITP entries.
+PITA....
+No, it seems to build without it.
----
-
-Hmmm - the Debian folder here still has files unmodified from King. Oh yes, I
was stuck on libdsol1-xml-java. Back to that.
-
-It looks like there is a newer Acacia binary but no source. No matter, I
shall press on with 1.52.
+Acacia 1.52 source is on Sourceforge but otherwise the source is on GitHub.
...
-Right, by the looks of it I can build ssj.jar without unuran jni support,
which makes life simpler. I may as
+I currently build ssj.jar without unuran jni support, which makes life simpler
and doesn't
+seem to be needed to compile Acacia (not fully tested yet but will be). I may
as
well compile chrono support as this just needs standard system libs.
-Also not sure why I was working on libdsol1-xml-java as it is not in Acacia
and not needed.
-
-So, that should be it...
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