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commit 66ce3599f22a5e4cb27337c3f73c9dc449ad8dc5 Author: Alexandre Mestiashvili <[email protected]> Date: Wed Jan 31 12:20:40 2018 +0100 Update d/tests/run-unit-test, export BOWTIE_INDEXES, enable test for example9 --- debian/tests/run-unit-test | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test index 2b3222b..235300c 100644 --- a/debian/tests/run-unit-test +++ b/debian/tests/run-unit-test @@ -1,4 +1,5 @@ #!/bin/sh -e +export BOWTIE_INDEXES='indexes' if [ "$1" = "test_at_build_time" ] ; then export PATH=.:$PATH @@ -51,5 +52,5 @@ bowtie -a -m 5 -v 2 e_coli --suppress 1,5,6,7 -c ATGCATCATGCGCCAT > example8.o check_result example8 # Disabling test as the output of this version of bowtie differs from the older versions and # causes check_result to fail -#bowtie -a -m 3 --best --strata -v 2 e_coli --suppress 1,5,6,7 -c ATGCATCATGCGCCAT > example9.out +bowtie -a -m 3 --best --strata -v 2 e_coli --suppress 1,5,6,7 -c ATGCATCATGCGCCAT > example9.out #check_result example9 -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/bowtie.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
