This is an automated email from the git hooks/post-receive script. jdutheil-guest pushed a commit to branch master in repository libbpp-seq.
commit d9b3c89e75663c3b6d06cc62260d4b33d36f3fb8 Merge: 7b9d17b 0dc6a7e Author: Julien Y. Dutheil <[email protected]> Date: Mon Feb 5 17:34:26 2018 +0100 Update upstream source from tag 'upstream/2.3.2' Update to upstream version '2.3.2' with Debian dir cd9f658dd636450200d778ccb3a9fa6073a2771a Doxyfile | 477 +++++-------- src/Bpp/Seq/Alphabet/AlphabetTools.cpp | 1 + src/Bpp/Seq/Alphabet/AlphabetTools.h | 5 +- src/Bpp/Seq/Alphabet/CodonAlphabet.cpp | 163 +++-- src/Bpp/Seq/Alphabet/CodonAlphabet.h | 577 +++++++++++----- src/Bpp/Seq/Alphabet/WordAlphabet.cpp | 14 +- src/Bpp/Seq/Alphabet/WordAlphabet.h | 738 ++++++++++++--------- src/Bpp/Seq/CodonSiteTools.cpp | 13 +- src/Bpp/Seq/CodonSiteTools.h | 2 +- .../Container/VectorProbabilisticSiteContainer.cpp | 187 ------ .../Container/VectorProbabilisticSiteContainer.h | 123 ---- src/Bpp/Seq/SequenceTools.cpp | 22 +- src/Bpp/Seq/StringSequenceTools.cpp | 8 +- src/Bpp/Seq/SymbolListTools.cpp | 4 +- test/CMakeLists.txt | 2 + test/test_alphabets.cpp | 9 + 16 files changed, 1222 insertions(+), 1123 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/libbpp-seq.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
