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The page "DebianMedBio" has been deleted by MichaelCrusoe: https://wiki.debian.org/DebianMedBio?action=diff&rev1=15&rev2=16 Comment: Out of date - med-bio is a metapackage from the DebianMed DebianPureBlends. It contains the software listed on [[http://debian-med.alioth.debian.org/tasks/bio|the tasks page]]. You might also like to notice the [[http://debian-med.alioth.debian.org/tasks/bio-dev|packages for developing biological applications]].This page gives some more fine grained structure regarding working fields and popularity contest statistics for the relevant packages. - ==== Phylogeny: ==== - - fastdnaml, njplot, tree-puzzle, phylip, treetool - - [[http://people.debian.org/~igloo/popcon-graphs/index.php?packages=fastdnaml+njplot+tree-puzzle+phylip+treetool&show_installed=on&want_legend=on&beenhere=1|Popularity report]] - - ==== Sequence alignment: ==== - - blast2, hmmer, exonerate, boxshade, clustalw, seaview, muscle, t-coffee, sim4, sibsim4, arb, dialign, kalign, probcons, wise, amap-align, poa - - [[http://people.debian.org/~igloo/popcon-graphs/index.php?packages=blast2+hmmer+exonerate+boxshade+clustalw+seaview+muscle+t-coffee+sim4+sibsim4+arb+dialign+kalign+probcons+wise+amap-align+poa&show_installed=on&want_legend=on&beenhere=1|Popularity report]] - - ==== Genetics: ==== - - r-cran-qtl, fastlink, loki - - [[http://people.debian.org/~igloo/popcon-graphs/index.php?packages=r-cran-qtl+fastlink+loki&show_installed=on&want_legend=on&beenhere=1|Popularity report]] - - ==== Structures: ==== - - garlic, pymol, rasmol, ghemical, gromacs, openbabel, autodock - - [[http://people.debian.org/~igloo/popcon-graphs/index.php?packages=garlic+pymol+rasmol+readseq+ghemical+gromacs+openbabel+autodock&show_installed=on&want_legend=on&beenhere=1|Popularity report]] - - - - - ==== Others: ==== - - ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11, readseq, tigr-glimmer, bugsx, molphy, textopo, gff2aplot, gff2ps, gdpc, mipe, perlprimer, mozilla-biofox, biosquid - - [[http://people.debian.org/~igloo/popcon-graphs/index.php?packages=ncbi-epcr+ncbi-tools-bin+ncbi-tools-x11+readseq+tigr-glimmer+bugsx+molphy+textopo+gff2aplot+gff2ps+gdpc+mipe+perlprimer+mozilla-biofox+biosquid&show_installed=on&want_legend=on&beenhere=1|Popularity report]] - - - ==== More information ==== - - [[http://qa.debian.org/developer.php?packages=fastdnaml+njplot+tree-puzzle+phylip+treetool+hmmer+boxshade+clustalw+seaview+muscle+t-coffee+sim4+sibsim4+arb+dialign+kalign+probcons+wise+amap-align+poa+qtl+fastlink+loki+garlic+epcr+ncbi-tools6+pymol+rasmol+readseq+tigr-glimmer+bugsx+ghemical+molphy+textopo+gff2aplot+gff2ps+gdpc+mipe+perlprimer+biofox+gromacs+biosquid+exonerate+openbabel|Technical summary]] - - - ==== Put any hints to interesting software here! ==== - If you know some relevant software, which is not listed at [[http://debian-med.alioth.debian.org/tasks/bio.html|the bio tasks page]] or [[http://debian-med.alioth.debian.org/tasks/bio-dev.html|the bio-dev tasks page]] just drop us a note here. - _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
