Dylan Aïssi pushed to branch master at Debian Med / beagle

Commits:
43688a9c by Dylan Aïssi at 2018-10-02T21:48:42Z
Update changelogs

- - - - -
39ff6be1 by Dylan Aïssi at 2018-10-02T21:49:40Z
Update my email

- - - - -


4 changed files:

- debian/changelog
- debian/control
- debian/rules
- debian/upstream.docs/release_notes


Changes:

=====================================
debian/changelog
=====================================
@@ -1,8 +1,10 @@
-beagle (5.0-180915+dfsg-2) UNRELEASED; urgency=medium
+beagle (5.0-180928+dfsg-1) UNRELEASED; urgency=medium
 
+  * New upstream release.
   * Fix watch file.
+  * Update my email.
 
- -- Dylan Aïssi <[email protected]>  Thu, 20 Sep 2018 21:43:26 +0200
+ -- Dylan Aïssi <[email protected]>  Tue, 02 Oct 2018 23:47:21 +0200
 
 beagle (5.0-180915+dfsg-1) unstable; urgency=medium
 


=====================================
debian/control
=====================================
@@ -1,6 +1,6 @@
 Source: beagle
 Maintainer: Debian Med Packaging Team 
<[email protected]>
-Uploaders: Dylan Aïssi <[email protected]>
+Uploaders: Dylan Aïssi <[email protected]>
 Section: science
 Priority: optional
 Build-Depends: debhelper (>= 11~),


=====================================
debian/rules
=====================================
@@ -8,7 +8,7 @@ export CLASSPATH=/usr/share/java/htsjdk.jar
 
 override_jh_build:
        mkdir SRC/
-       cp -t SRC/ -r beagleutil blbutil bref haplotype imp main math phase 
sample vcf
+       cp -t SRC/ -r beagleutil blbutil bref haplotype imp ints main math 
phase sample vcf
        jh_build --javacopts="-source 1.8" --javadoc-opts="-source 1.8" 
--main="main.Main" beagle.jar SRC/
        jh_build --javacopts="-source 1.8" --javadoc-opts="-source 1.8" 
--main="bref.Bref3" bref3.jar SRC/
 


=====================================
debian/upstream.docs/release_notes
=====================================
@@ -46,3 +46,7 @@ Beagle 5.0 (10Sep18.879) release notes
 Beagle 5.0 (15Sep18.8a0) release notes
 =============================================
 * Fixed a bug appearing when analysis window has only one target marker
+
+Beagle 5.0 (28Sep18.793) release notes
+=============================================
+* Refactored several classes



View it on GitLab: 
https://salsa.debian.org/med-team/beagle/compare/7bc94d8bec66c1529a4d758c33d57510533b90e5...39ff6be1729c3f9ba217f8478001863b8545ee31

-- 
View it on GitLab: 
https://salsa.debian.org/med-team/beagle/compare/7bc94d8bec66c1529a4d758c33d57510533b90e5...39ff6be1729c3f9ba217f8478001863b8545ee31
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