Alexandre Mestiashvili pushed to branch master at Debian Med / gmap
Commits: 1fc4e479 by Alexandre Mestiashvili at 2019-01-31T15:32:15Z Drop bigendian.patch, as gmap is build for amd64 only - - - - - d987d8dd by Alexandre Mestiashvili at 2019-01-31T18:13:15Z Set Architecture to amd64 in d/control - - - - - 314d6b7b by Alexandre Mestiashvili at 2019-01-31T18:24:06Z Use wildcard for lintian overrides - - - - - daf99216 by Alexandre Mestiashvili at 2019-01-31T18:31:46Z Remove overrides for gmapl* and gsnapl* - - - - - e69ced53 by Alexandre Mestiashvili at 2019-01-31T18:41:33Z Update changelog Gbp-Dch: Ignore - - - - - 5 changed files: - debian/changelog - debian/control - debian/gmap.lintian-overrides - − debian/patches/bigendian.patch - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,11 +1,25 @@ -gmap (2019-01-24-1) UNRELEASED; urgency=medium +gmap (2019-01-24-1) unstable; urgency=medium + [ Andreas Tille ] * New upstream version * debhelper 12 * Standards-Version: 4.3.0 * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target - -- Andreas Tille <[email protected]> Thu, 31 Jan 2019 14:07:07 +0100 + [ Alexandre Mestiashvili ] + * Drop bigendian.patch, as gmap is build for amd64 only + * Set Architecture to amd64 in d/control + * Remove overrides for gmapl* and gsnapl* + + -- Alexandre Mestiashvili <[email protected]> Thu, 31 Jan 2019 19:39:59 +0100 + +gmap (2018-07-04-5) unstable; urgency=medium + + * Limit architectures to amd64 + * Use wildcard for lintian overrides for gmap/gsnap tools + * Upload to unstable + + -- Alexandre Mestiashvili <[email protected]> Sun, 06 Jan 2019 14:36:33 +0100 gmap (2018-09-27-2) experimental; urgency=medium ===================================== debian/control ===================================== @@ -17,7 +17,7 @@ Vcs-Git: https://salsa.debian.org/med-team/gmap.git Homepage: http://research-pub.gene.com/gmap Package: gmap -Architecture: any +Architecture: amd64 Depends: ${misc:Depends}, ${perl:Depends}, ${shlibs:Depends} ===================================== debian/gmap.lintian-overrides ===================================== @@ -1,6 +1,2 @@ -gmap: binary-without-manpage usr/bin/gmap.sse41 -gmap: binary-without-manpage usr/bin/gsnap.sse41 -gmap: binary-without-manpage usr/bin/gmapl -gmap: binary-without-manpage usr/bin/gmapl.sse41 -gmap: binary-without-manpage usr/bin/gsnapl -gmap: binary-without-manpage usr/bin/gsnapl.sse41 +gmap: binary-without-manpage usr/bin/gmap.* +gmap: binary-without-manpage usr/bin/gsnap.* ===================================== debian/patches/bigendian.patch deleted ===================================== @@ -1,63 +0,0 @@ -Subject: Update bigendian.[c,h] files in attempt to fix builds on arm and mips -Author: Upstream -Forwarded: not-needed ---- a/src/bigendian.c -+++ b/src/bigendian.c -@@ -19,6 +19,45 @@ Bigendian_write_char (unsigned char valu - } - - -+ -+/************************************************************************ -+ * Unsigned short -+ ************************************************************************/ -+ -+size_t -+Bigendian_fwrite_ushort (unsigned short value, FILE *fp) { -+ unsigned char buf[2]; -+ -+ buf[1] = value & 0xff; -+ buf[0] = (value >>= 8) & 0xff; -+ if (fwrite(buf,sizeof(unsigned short),2,fp) == 0) { -+ /* Should set error indicator for stream and set errno */ -+ return 0; -+ } else { -+ return 1; -+ } -+} -+ -+size_t -+Bigendian_fwrite_ushorts (unsigned short *array, int n, FILE *fp) { -+ unsigned char buf[4]; -+ unsigned short value; -+ int i; -+ -+ for (i = 0; i < n; i++) { -+ value = array[i]; -+ buf[1] = value & 0xff; -+ buf[0] = (value >>= 8) & 0xff; -+ if (fwrite(buf,sizeof(unsigned short),2,fp) == 0) { -+ /* Should set error indicator for stream and set errno */ -+ return 0; -+ } -+ } -+ return n; -+} -+ -+ -+ - /************************************************************************ - * Unsigned short - ************************************************************************/ ---- a/src/bigendian.h -+++ b/src/bigendian.h -@@ -101,6 +101,9 @@ Bigendian_fwrite_double (double value, F - #define FWRITE_USHORT(x,fp) Bigendian_fwrite_ushort(x,fp) - #define FWRITE_USHORTS(a,n,fp) Bigendian_fwrite_ushorts(a,n,fp) - -+#define FWRITE_USHORT(x,fp) Bigendian_fwrite_ushort(x,fp) -+#define FWRITE_USHORTS(a,n,fp) Bigendian_fwrite_ushorts(a,n,fp) -+ - #define FREAD_CHARS(a,n,fp) fread(a,sizeof(char),n,fp) - #define FWRITE_CHARS(a,n,fp) fwrite(a,sizeof(char),n,fp) - ===================================== debian/patches/series ===================================== @@ -1,3 +1,2 @@ -bigendian.patch only-do-cpuid-on-amd64-i386.patch install-data-local View it on GitLab: https://salsa.debian.org/med-team/gmap/compare/a6c19d0f858e91707a71ca3c169fd23b38161bd7...e69ced53c8fd89f1c6dfc60cc1c3116070e33598 -- View it on GitLab: https://salsa.debian.org/med-team/gmap/compare/a6c19d0f858e91707a71ca3c169fd23b38161bd7...e69ced53c8fd89f1c6dfc60cc1c3116070e33598 You're receiving this email because of your account on salsa.debian.org.
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