Steffen Möller pushed to branch master at Debian Med / bcbio
Commits: d8902ed2 by Steffen Möller at 2019-04-18T15:46:53Z Updates to bcbio's TODO list - - - - - 1 changed file: - debian/TODO Changes: ===================================== debian/TODO ===================================== @@ -30,6 +30,7 @@ Now at https://github.com/AdamaJava/adamajava add hisat2_extract_splice_sites.py to the hisat2 package -> Done in Git in preparation for 2.1.0-3 + -> Added arch-indep python3-hisat2 package Package MutliQC - in salsa https://salsa.debian.org/med-team/multiqc @@ -37,8 +38,7 @@ Package MutliQC - in salsa package sailfish https://salsa.debian.org/med-team/sailfish -package kallisto - -> in new queue +package kallisto (in new queue) package r-wasabi https://github.com/COMBINE-lab/wasabi @@ -67,6 +67,11 @@ https://github.com/fulcrumgenomics/fgbio package manta https://github.com/Illumina/manta/ + - Steffen works on this one + +package strelka +https://github.com/Illumina/strelka/releases + - Steffen works on this one package lumpy https://github.com/arq5x/lumpy-sv @@ -76,7 +81,7 @@ http://research.cs.wisc.edu/wham/ # An easy one: package tophat-recondition -https://github.com/cbrueffer/tophat-recondition +https://github.com/cbrueffer/tophat-recondition (in new queue) package qualimap https://salsa.debian.org/med-team/qualimap View it on GitLab: https://salsa.debian.org/med-team/bcbio/commit/d8902ed2a6b6f74f65053aed76549b4a51587b75 -- View it on GitLab: https://salsa.debian.org/med-team/bcbio/commit/d8902ed2a6b6f74f65053aed76549b4a51587b75 You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
