Steffen Möller pushed to branch master at Debian Med / bcbio
Commits: 86669a52 by Steffen Möller at 2019-06-03T22:58:10Z Update on pizzly packaging - - - - - 1 changed file: - debian/TODO Changes: ===================================== debian/TODO ===================================== @@ -4,7 +4,15 @@ package bamtofastq from biobambam2 package snpEff http://snpeff.sourceforge.net/ https://salsa.debian.org/med-team/snpeff/blob/master/debian/changelog - The packaging needs help with its dependencies. + The packaging needs help with its dependencies: + apfloat 1.6.3: + https://github.com/mtommila/apfloat + http://www.apfloat.org/apfloat_java/maven.html + charts4j 1.3: + https://mvnrepository.com/artifact/com.googlecode.charts4j/charts4j/1.3 + com.typesafe.akka:akka-actor 2.0.1 + distlib 0.9.1: + https://sourceforge.net/projects/statdistlib/?source=navbar package atropos https://salsa.debian.org/med-team/atropos (in new queue) @@ -83,12 +91,16 @@ package seqcluster package pizzly https://github.com/pmelsted/pizzly - including pizzly_flatten_json.py - Steffen has a look + https://salsa.debian.org/med-team/pizzly (fails in pbuilder - help requested) + still needs to include pizzly_flatten_json.py package vt https://github.com/atks/vt +package Rmath + https://github.com/atks/Rmath + needed by vt + package fgbio https://github.com/fulcrumgenomics/fgbio Anyone much into scala? View it on GitLab: https://salsa.debian.org/med-team/bcbio/commit/86669a52ae53c3cf475c4b5d3dba6de8c6740836 -- View it on GitLab: https://salsa.debian.org/med-team/bcbio/commit/86669a52ae53c3cf475c4b5d3dba6de8c6740836 You're receiving this email because of your account on salsa.debian.org.
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