Saira Hussain pushed to branch master at Debian Med / cdbfasta
Commits: 39d0e6d7 by Saira Hussain at 2019-07-31T14:20:10Z Final unit tests - - - - - 1 changed file: - debian/tests/run-unit-tests Changes: ===================================== debian/tests/run-unit-tests ===================================== @@ -20,16 +20,13 @@ gunzip -r * set -x # Create the index file for a multi-FASTA -cdbfasta +cdbfasta ebola.fasta # Pull records based on the index file -cdbyank - -# Retrieve records from the database file -cdbyank -a '' +cdbyank -a "Cote_d'Ivoire_ebolavirus,_complete_genome" ebola.fasta.cidx # Retrieve specific sequence ranges -cdbyank -a '' <right_coo> <left_coo> +cdbyank -a "Cote_d'Ivoire_ebolavirus,_complete_genome 32 112" -R ebola.fasta.cidx # Test the compression - +cdbfasta ebola.fasta -z ebola.cdbz View it on GitLab: https://salsa.debian.org/med-team/cdbfasta/commit/39d0e6d7f4a24add155d10d10db831bd918bc8df -- View it on GitLab: https://salsa.debian.org/med-team/cdbfasta/commit/39d0e6d7f4a24add155d10d10db831bd918bc8df You're receiving this email because of your account on salsa.debian.org.
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