Shayan Doust pushed to branch master at Debian Med / fast
Commits: 29f27eae by Shayan Doust at 2019-09-01T17:42:28Z Write a description for the libfast-examples - - - - - dc55d957 by Shayan Doust at 2019-09-01T17:43:54Z Install libfast-examples description file - - - - - 269aa913 by Shayan Doust at 2019-09-01T20:07:32Z Directory creation is redundant now so remove this - - - - - 3 changed files: - debian/libfast-examples.install - + debian/missing-sources/using_libfast-examples - debian/patches/modify_libs_and_output.patch Changes: ===================================== debian/libfast-examples.install ===================================== @@ -22,3 +22,4 @@ debian/tmp/usr/fast/bin/NonLocalMeans2D usr/lib/fast debian/tmp/usr/fast/bin/seededRegionGrowingSegmentation usr/lib/fast debian/tmp/usr/fast/bin/streamImagesFromDisk usr/lib/fast debian/tmp/usr/fast/bin/testFAST usr/lib/fast +debian/missing-sources/using_libfast-examples usr/share/doc/libfast-examples/examples ===================================== debian/missing-sources/using_libfast-examples ===================================== @@ -0,0 +1,20 @@ +Synopsis +---------- + +The libfast-examples package encompasses a variety of binaries for the "fast" package. These binaries +are located at /usr/lib/fast and can be selectively executed alongside either the libfast-data package or +any external data. These binaries can be used for experimentation, testing the framework or even +used for computation. + +Usage +---------- + +The example binaries can either use and compute your data or data from the libfast-data package. If +using libfast-data, download this package and extract the compressed file (FAST_Test_Data.xz) situated in +/usr/lib/fast. Most of the binaries will then automatically look in the newly extracted ../data +directory when run. + +In some cases, the path to a specific data needs to be stated. For instance, the "liverVesselSegmentation" +binary requires a path to the CT file as an argument. + +Information about these binaries, and their source origins, can be read at https://github.com/smistad/FAST/wiki/Examples ===================================== debian/patches/modify_libs_and_output.patch ===================================== @@ -5,8 +5,8 @@ Author: Shayan Doust <[email protected]> Index: fast/CMakeLists.txt =================================================================== ---- fast.orig/CMakeLists.txt 2019-08-31 12:13:11.067543072 +0100 -+++ fast/CMakeLists.txt 2019-08-31 12:13:59.735356876 +0100 +--- fast.orig/CMakeLists.txt 2019-09-01 19:24:24.824877063 +0100 ++++ fast/CMakeLists.txt 2019-09-01 19:24:49.669024504 +0100 @@ -34,7 +34,7 @@ option(FAST_MODULE_WholeSlideImaging "Build whole slide imaging module" OFF) option(FAST_MODULE_Clarius "Build clarius ultrasound module" OFF) @@ -56,14 +56,12 @@ Index: fast/CMakeLists.txt ## Build test executable if(FAST_BUILD_TESTS) add_executable(testFAST ${FAST_TEST_SOURCE_FILES} source/FAST/Algorithms/CoherentPointDrift/Rigid.cpp source/FAST/Algorithms/CoherentPointDrift/Rigid.hpp source/FAST/Algorithms/CoherentPointDrift/Affine.cpp source/FAST/Algorithms/CoherentPointDrift/Affine.hpp) -@@ -242,6 +263,10 @@ - # dlls automatically to the bin folder. +@@ -243,5 +264,8 @@ include(cmake/FASTCustomCommands.cmake) endif(NOT FAST_BUILD_QT5 AND WIN32) -+execute_process(COMMAND mkdir -p usr/share/fast/assets) -+execute_process(COMMAND cp -r ../doc/images usr/share/fast/assets) + +install(TARGETS FAST-STATIC DESTINATION .) +install(TARGETS FAST DESTINATION .) - ++ include(cmake/ModulePython.cmake) include(cmake/InstallFAST.cmake) View it on GitLab: https://salsa.debian.org/med-team/fast/compare/1babb75b56b002c2e3d428cc56b940b71788e8ad...269aa9135b62ca4dacfe92ac24bbd507b6212407 -- View it on GitLab: https://salsa.debian.org/med-team/fast/compare/1babb75b56b002c2e3d428cc56b940b71788e8ad...269aa9135b62ca4dacfe92ac24bbd507b6212407 You're receiving this email because of your account on salsa.debian.org.
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