Dylan Aïssi pushed to branch master at Debian Med / beagle
Commits: 75eb643c by Dylan Aïssi at 2019-09-13T15:56:11Z Fix autopkgtest tests - - - - - 3db4863d by Dylan Aïssi at 2019-09-13T19:19:30Z Upload to unstable - - - - - 2 changed files: - debian/changelog - debian/tests/run-sample-analysis Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,9 @@ +beagle (5.1-190824+dfsg-2) unstable; urgency=medium + + * Fix autopkgtest tests. + + -- Dylan Aïssi <[email protected]> Fri, 13 Sep 2019 21:18:50 +0200 + beagle (5.1-190824+dfsg-1) unstable; urgency=medium * New upstream release. ===================================== debian/tests/run-sample-analysis ===================================== @@ -14,6 +14,7 @@ cp -a /usr/share/doc/${pkg}/examples/* $ADTTMP BEAGLE_TEST='java -jar /usr/share/beagle/beagle.jar' # Generate necessary files +gzip test.vcf zcat test.vcf.gz | cut -f1-190 | tr '/' '|' | gzip > ref.vcf.gz zcat test.vcf.gz | cut -f1-9,191-200 | gzip > target.vcf.gz java -jar /usr/share/beagle/bref3.jar ref.vcf.gz > ref.bref3 View it on GitLab: https://salsa.debian.org/med-team/beagle/compare/f052ab3485c2cdcdd6d9906b5c40c5430111f0a3...3db4863db6c335767b40bb15557284a9b0ce17d4 -- View it on GitLab: https://salsa.debian.org/med-team/beagle/compare/f052ab3485c2cdcdd6d9906b5c40c5430111f0a3...3db4863db6c335767b40bb15557284a9b0ce17d4 You're receiving this email because of your account on salsa.debian.org.
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