Michael R. Crusoe pushed to branch master at Debian Med / racon
Commits: f4113ce1 by Michael R. Crusoe at 2019-11-12T14:45:04Z Set the racon_wrapper to use /usr/bin/rampler - - - - - 3 changed files: - debian/changelog - debian/control - debian/patches/use_debian_packaged_libs.patch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,9 @@ +racon (1.4.10-2) UNRELEASED; urgency=medium + + * Set the racon_wrapper to use /usr/bin/rampler + + -- Michael R. Crusoe <[email protected]> Tue, 12 Nov 2019 15:44:13 +0100 + racon (1.4.10-1) unstable; urgency=medium * Team upload. ===================================== debian/control ===================================== @@ -21,7 +21,7 @@ Package: racon Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends} -Recommends: python3 +Recommends: python3, rampler Description: consensus module for raw de novo DNA assembly of long uncorrected reads Racon is intended as a standalone consensus module to correct raw contigs generated by rapid assembly methods which do not include a ===================================== debian/patches/use_debian_packaged_libs.patch ===================================== @@ -46,3 +46,12 @@ Description: Use Debian packaged libraries if (racon_enable_cuda) target_link_libraries(racon_test cudapoa cudaaligner) endif() +@@ -130,7 +115,7 @@ + + if (racon_build_wrapper) + set(racon_path ${PROJECT_BINARY_DIR}/bin/racon) +- set(rampler_path ${PROJECT_BINARY_DIR}/vendor/rampler/bin/rampler) ++ set(rampler_path /usr/bin/rampler) + configure_file(${PROJECT_SOURCE_DIR}/scripts/racon_wrapper.py + ${PROJECT_BINARY_DIR}/${CMAKE_FILES_DIRECTORY}/racon_wrapper) + file(COPY ${PROJECT_BINARY_DIR}/${CMAKE_FILES_DIRECTORY}/racon_wrapper View it on GitLab: https://salsa.debian.org/med-team/racon/commit/f4113ce161e94e107d7d1e2663fd7421ba56a207 -- View it on GitLab: https://salsa.debian.org/med-team/racon/commit/f4113ce161e94e107d7d1e2663fd7421ba56a207 You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
