Steffen Möller pushed to branch master at Debian Med / bcbio
Commits: f8a1a562 by Steffen Möller at 2019-12-11T10:15:36Z New upstream version 1.1.9 - - - - - 1396015f by Steffen Möller at 2019-12-11T10:16:12Z Update upstream source from tag 'upstream/1.1.9' Update to upstream version '1.1.9' with Debian dir 1c04d3ef7455100580dc4c5f1870b80f25082d30 - - - - - 39e67630 by Steffen Möller at 2019-12-11T14:06:47Z New upstream version - sadly few changes on our side - - - - - 30 changed files: - HISTORY.md - bcbio/bam/__init__.py - bcbio/broad/picardrun.py - bcbio/chipseq/__init__.py - + bcbio/chipseq/atac.py - bcbio/chipseq/macs2.py - bcbio/chipseq/peaks.py - bcbio/heterogeneity/chromhacks.py - bcbio/ngsalign/bwa.py - bcbio/ngsalign/star.py - bcbio/pipeline/rnaseq.py - bcbio/pipeline/run_info.py - bcbio/pipeline/sample.py - bcbio/qc/multiqc.py - bcbio/qc/viral.py - bcbio/upload/__init__.py - bcbio/variation/effects.py - debian/TODO - debian/changelog - debian/rules - docs/contents/configuration.rst - docs/contents/internals.rst - docs/contents/outputs.rst - requirements-conda.txt - requirements.txt - scripts/bcbio_setup_genome.py - setup.py - + tests/data/atac/atac_1.fq - + tests/data/atac/atac_2.fq - + tests/data/automated/run_info-atacseq.yaml The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/bcbio/compare/3db580be7b9324fe40b34003966f7ecdcf1402e0...39e6763084c5cccc0439e05924ea68ea9eccdeef -- View it on GitLab: https://salsa.debian.org/med-team/bcbio/compare/3db580be7b9324fe40b34003966f7ecdcf1402e0...39e6763084c5cccc0439e05924ea68ea9eccdeef You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
