Liubov Chuprikova pushed to branch master at Debian Med / q2-demux
Commits: c8fac723 by Liubov Chuprikova at 2019-12-29T15:26:34Z Needs qiime and q2templates >= 2019.10.0 - - - - - 3d03a319 by Liubov Chuprikova at 2019-12-29T15:51:56Z Add autopkgtest - - - - - 4 changed files: - debian/changelog - debian/control - debian/tests/control - debian/tests/run-unit-test Changes: ===================================== debian/changelog ===================================== @@ -4,6 +4,8 @@ q2-demux (2019.10.0-1) UNRELEASED; urgency=medium * debhelper-compat 12 * Standards-Version: 4.4.1 * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target + * Needs qiime and q2templates >= 2019.10.0 + * Add autopkgtest -- Liubov Chuprikova <[email protected]> Sun, 29 Dec 2019 18:12:25 +0300 ===================================== debian/control ===================================== @@ -14,9 +14,9 @@ Build-Depends: debhelper-compat (= 12), python3-skbio, python3-psutil, python3-seaborn, - qiime, + qiime (>= 2019.10.0), q2-types, - q2templates + q2templates (>= 2019.10.0) Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/q2-demux Vcs-Git: https://salsa.debian.org/med-team/q2-demux.git ===================================== debian/tests/control ===================================== @@ -1,3 +1,3 @@ Tests: run-unit-test -Depends: @ +Depends: @, python3-pytest-cov Restrictions: allow-stderr ===================================== debian/tests/run-unit-test ===================================== @@ -1,18 +1,22 @@ #!/bin/bash set -e -pkg=#PACKAGENAME# +pkg=q2_demux if [ "${AUTOPKGTEST_TMP}" = "" ] ; then AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) - # Double quote below to expand the temporary directory variable now versus - # later is on purpose. - # shellcheck disable=SC2064 trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM fi -cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}" +cp -a /usr/lib/python3/dist-packages/${pkg}* "${AUTOPKGTEST_TMP}" +mkdir ${AUTOPKGTEST_TMP}/q2_demux/_summarize/assets/dist cd "${AUTOPKGTEST_TMP}" -#do_stuff_to_test_package# +if [ ! -f /usr/lib/python3/dist-packages/pytest_cov/__init__.py ] ; then + echo "Please install package python3-pytest-cov to run this script" + exit 1 +fi + +# Run build-time tests +py.test-3 --cov=${pkg} View it on GitLab: https://salsa.debian.org/med-team/q2-demux/compare/c12b365dc8fdb09d666a37ad031696acc19d1056...3d03a3196958a8b2520c77fa3a69f9eea12ec846 -- View it on GitLab: https://salsa.debian.org/med-team/q2-demux/compare/c12b365dc8fdb09d666a37ad031696acc19d1056...3d03a3196958a8b2520c77fa3a69f9eea12ec846 You're receiving this email because of your account on salsa.debian.org.
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