Andreas Tille pushed to branch debian/jessie-backports at Debian Med / ncbi-blastplus
Commits: c943f552 by Aaron M. Ucko at 2016-08-03T11:06:19-04:00 Imported Upstream version 2.4.0 - - - - - 74e6c3db by Aaron M. Ucko at 2016-08-03T18:49:48-04:00 Imported Upstream version 2.4.0 - - - - - 06564964 by Olivier Sallou at 2016-12-01T14:38:54+01:00 New upstream version 2.5.0 - - - - - d2179e98 by Olivier Sallou at 2016-12-01T14:39:29+01:00 Updated version 2.5.0 from 'upstream/2.5.0' with Debian dir e6f7d6e5bafd2b66fe885214be2aeb69a94e79f6 - - - - - 87072b85 by Olivier Sallou at 2016-12-01T15:42:13+01:00 new upstream release 2.5.0, update patches to match release - - - - - 8cb00b84 by Aaron M. Ucko at 2016-12-05T20:42:35-05:00 Start work on ncbi-blast+ 2.5.0-2. - - - - - c0f5a8c1 by Aaron M. Ucko at 2016-12-05T23:05:55-05:00 fix_lib_deps: Also patch Makefile.blast_macros.mk. Add blast to BLAST_LIBS to clear up link errors that could otherwise occur. - - - - - 96c2b0f9 by Aaron M. Ucko at 2016-12-05T23:15:53-05:00 B-D on libgnutls28-dev to enable HTTPS support. - - - - - 4d9d362b by Aaron M. Ucko at 2016-12-05T23:16:19-05:00 Fully take blast2 over from ncbi-tools6. The C implementation has retired. - - - - - ab421cee by Aaron M. Ucko at 2016-12-05T23:16:55-05:00 Finalize ncbi-blast+ 2.5.0-2 for upload to unstable. - - - - - b2d16f3b by Aaron M. Ucko at 2016-12-07T21:30:27-05:00 Start work on ncbi-blast+ 2.5.0-3. - - - - - 4557e6e3 by Aaron M. Ucko at 2016-12-07T21:46:20-05:00 New suppress_gnutls_version_check patch. Prevent bailing when the exact compile-time and runtime GNU TLS versions differ; trust dpkg to disallow combinations that are actually incompatible. - - - - - 308ec1f2 by Aaron M. Ucko at 2016-12-07T21:46:40-05:00 Present config.log if configure fails. debian/rules: If configure fails (as has been happening on alpha), present (BUILD/status/)config.log before bailing. - - - - - b7fec85b by Aaron M. Ucko at 2016-12-07T21:47:13-05:00 Finalize ncbi-blast+ 2.5.0-3 for upload to unstable. - - - - - 5b6c1b1e by Aaron M. Ucko at 2016-12-14T22:37:14-05:00 Start work on ncbi-blast+ 2.5.0-4. - - - - - f9e8ec32 by Aaron M. Ucko at 2016-12-14T22:44:19-05:00 New optionally_keep_sequence patch (#792510). Hang on to sequence data even if -parse_deflines recognized a non-local ID, on the condition that the environment variable BLAST_ALWAYS_KEEP_SEQUENCE (or configuration parameter [BLAST] always_keep_sequence) is set to a "true" value (English-only, case-insensitive true, t, yes, y, or 1). - - - - - 43a0f403 by Aaron M. Ucko at 2016-12-14T22:46:45-05:00 Finalize ncbi-blast+ 2.5.0-4 for upload to unstable. - - - - - edfc1313 by Olivier Sallou at 2017-01-15T17:12:04+00:00 New upstream version 2.6.0 - - - - - 667fb222 by Olivier Sallou at 2017-01-15T17:12:12+00:00 Updated version 2.6.0 from 'upstream/2.6.0' with Debian dir e42d5a2a50d036aecd1289ba1e5ef2e49790dfa4 - - - - - f0a587df by Olivier Sallou at 2017-01-15T17:13:59+00:00 prepare new upstream 2.6.0, update patches - - - - - c5cc948f by Olivier Sallou at 2017-01-15T17:53:45+00:00 prepare upload of new upstream release 2.6.0 - - - - - 42f3a525 by Andreas Tille at 2017-02-13T13:59:45+01:00 Merge branch 'master' into debian/jessie-backports - - - - - f8e6d6f8 by Andreas Tille at 2017-02-13T14:00:08+01:00 Rebuild for jessie-backports - - - - - 30 changed files: - c++/compilers/unix/GCC.sh - c++/compilers/unix/ICC.sh - c++/compilers/vs2013/build_exec.bat - c++/compilers/vs2013/configure.bat - c++/compilers/vs2013/dll/build/gbench/ncbi_gbench.sln - c++/compilers/vs2013/dll/build/gui/ncbi_gui_dll.sln - c++/compilers/vs2013/dll/build/ncbi_cpp_dll.sln - c++/compilers/vs2013/make.bat - c++/compilers/vs2013/ptb.bat - c++/compilers/vs2013/static/build/gui/ncbi_gui.sln - c++/compilers/vs2013/static/build/ncbi_cpp.sln - c++/compilers/vs2013/user/build/ncbi_user.sln - + c++/compilers/vs2015/Makefile.WinMain.app.msvc - + c++/compilers/vs2015/Makefile.wxWidgets.app.msvc - + c++/compilers/vs2015/build.sh - + c++/compilers/vs2015/build_exec.bat - + c++/compilers/vs2015/build_util.sh - + c++/compilers/vs2015/check.sh - + c++/compilers/vs2015/configure.bat - + c++/compilers/vs2015/datatool.bat - + c++/compilers/vs2015/dll/build/UtilityProjects/_CONFIGURE_.vcxproj - + c++/compilers/vs2015/dll/build/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj - + c++/compilers/vs2015/dll/build/UtilityProjects/configure._ - + c++/compilers/vs2015/dll/build/UtilityProjects/configure_dialog._ - + c++/compilers/vs2015/dll/build/all.bat - + c++/compilers/vs2015/dll/build/all_gbench.bat - + c++/compilers/vs2015/dll/build/all_gui.bat - + c++/compilers/vs2015/dll/build/all_ncbi.bat - + c++/compilers/vs2015/dll/build/gbench/UtilityProjects/_CONFIGURE_.vcxproj - + c++/compilers/vs2015/dll/build/gbench/UtilityProjects/_CONFIGURE_DIALOG_.vcxproj The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/compare/8707224a37ef624a8ec468d797b18ee83460a7a5...f8e6d6f8c938666710250ce9ed395a6594764b84 -- View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/compare/8707224a37ef624a8ec468d797b18ee83460a7a5...f8e6d6f8c938666710250ce9ed395a6594764b84 You're receiving this email because of your account on salsa.debian.org.
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