Dylan Aïssi pushed to branch master at Debian Med / plink1.9
Commits: e500885c by Dylan Aïssi at 2020-03-25T16:17:02+01:00 Bump changelog - - - - - f4d07830 by Dylan Aïssi at 2020-03-25T16:17:58+01:00 New upstream version 1.90~b6.16-200219 - - - - - 67558f8c by Dylan Aïssi at 2020-03-25T16:18:02+01:00 Update upstream source from tag 'upstream/1.90_b6.16-200219' Update to upstream version '1.90~b6.16-200219' with Debian dir 7bf761dba5329d4c00e14d73bd809edd21adb025 - - - - - 4 changed files: - debian/changelog - debian/upstream.docs/upstream.changelog - plink.c - plink_data.c Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,9 @@ +plink1.9 (1.90~b6.16-200219-1) UNRELEASED; urgency=medium + + * New upstream release. + + -- Dylan Aïssi <[email protected]> Wed, 25 Mar 2020 16:14:14 +0100 + plink1.9 (1.90~b6.16-200217-1) unstable; urgency=medium * New upstream release. ===================================== debian/upstream.docs/upstream.changelog ===================================== @@ -1,6 +1,6 @@ # Copy/Paste from https://www.cog-genomics.org/plink/1.9/ -17 Feb 2020: --bcf now parses header line IDX fields; previously, if e.g. a FILTER key and an INFO key were identical in a BCFv2.2 file, --bcf may have computed the wrong string index for FORMAT:GT, in which case import would fail. +19 Feb 2020: --bcf now parses header line IDX fields; previously, if e.g. a FILTER key and an INFO key were identical in a BCFv2.2 file, --bcf may have computed the wrong string index for FORMAT:GT, in which case import would fail. 21 Jan: "--extract range" and "--exclude range" no longer error out when their input files contain a chromosome code absent from the current dataset. ===================================== plink.c ===================================== @@ -105,7 +105,7 @@ static const char ver_str[] = #else " 32-bit" #endif - " (17 Feb 2020)"; + " (19 Feb 2020)"; static const char ver_str2[] = // include leading space if day < 10, so character length stays the same "" ===================================== plink_data.c ===================================== @@ -9085,7 +9085,8 @@ int32_t bcf_header_line_idx_check(char* line_iter, char* line_end, uint32_t* gt_ if (cc == ',') { continue; } - if (cc == '\n') { + // bugfix (19 Feb 2020) + if (cc == '>') { return 0; } break; View it on GitLab: https://salsa.debian.org/med-team/plink1-9/-/compare/23318f2d456b0ab6b0f4af1fc649a8e33117dca9...67558f8c437eb1bf513f57a844ab2bbdc43b7892 -- View it on GitLab: https://salsa.debian.org/med-team/plink1-9/-/compare/23318f2d456b0ab6b0f4af1fc649a8e33117dca9...67558f8c437eb1bf513f57a844ab2bbdc43b7892 You're receiving this email because of your account on salsa.debian.org.
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