Steffen Möller pushed to branch master at Debian Med / spades
Commits: b5ad813f by Steffen Moeller at 2020-05-03T20:31:01+02:00 routine-update: New upstream version - - - - - a1d38af1 by Steffen Moeller at 2020-05-03T20:31:02+02:00 New upstream version 3.14.1+dfsg - - - - - cb10850a by Steffen Moeller at 2020-05-03T20:31:15+02:00 Update upstream source from tag 'upstream/3.14.1+dfsg' Update to upstream version '3.14.1+dfsg' with Debian dir 6a4eb29a16306de4fd17c1f1e211a24a393dc1fe - - - - - b5f1a7e7 by Steffen Moeller at 2020-05-03T21:25:01+02:00 Adjusting patches - - - - - 30 changed files: - README.md - assembler/LICENSE - assembler/VERSION - assembler/changelog.html - assembler/manual.html - assembler/rnaspades_manual.html - assembler/spades.py - assembler/src/cmake/pack.cmake - assembler/src/common/io/CMakeLists.txt - + assembler/src/common/io/binary/genomic_info.cpp - assembler/src/common/io/graph/gfa_writer.hpp - assembler/src/common/modules/chromosome_remover.cpp - assembler/src/common/modules/mismatch_shall_not_pass.hpp - assembler/src/common/pipeline/CMakeLists.txt - assembler/src/common/pipeline/config_struct.cpp - assembler/src/common/pipeline/genomic_info.hpp - assembler/src/common/stages/CMakeLists.txt - assembler/src/common/pipeline/genomic_info_filler.cpp → assembler/src/common/stages/genomic_info_filler.cpp - assembler/src/common/pipeline/genomic_info_filler.hpp → assembler/src/common/stages/genomic_info_filler.hpp - assembler/src/common/utils/logger/logger.hpp - assembler/src/projects/corrector/main.cpp - assembler/src/projects/kmercount/read_filter.cpp - assembler/src/projects/spades/CMakeLists.txt - assembler/src/projects/spades/contig_output_stage.cpp - assembler/src/projects/spades/contig_output_stage.hpp - assembler/src/projects/spades/domain_graph.hpp - assembler/src/projects/spades/main.cpp - assembler/src/projects/spades/launch.hpp → assembler/src/projects/spades/pipeline.cpp - assembler/src/projects/spades/second_phase_setup.cpp - assembler/src/spades_pipeline/common/SeqIO.py The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/spades/-/compare/b7b8a5cefcaefe8543a6f7805d864d660f8a2157...b5f1a7e7d90da3c131da47bdbaaa48c3283d1c8b -- View it on GitLab: https://salsa.debian.org/med-team/spades/-/compare/b7b8a5cefcaefe8543a6f7805d864d660f8a2157...b5f1a7e7d90da3c131da47bdbaaa48c3283d1c8b You're receiving this email because of your account on salsa.debian.org.
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