Pranav Ballaney pushed to branch master at Debian Med / cgview
Commits: 41030c64 by Pranav Ballaney at 2020-05-09T10:41:43+05:30 Add autopkgtests - - - - - dd806b7c by Pranav Ballaney at 2020-05-09T10:43:12+05:30 Install docs - - - - - 9c7f4c72 by Pranav Ballaney at 2020-05-09T10:43:53+05:30 Update changelog - - - - - 5d454d2f by Pranav Ballaney at 2020-05-09T21:46:02+05:30 Add more autopkgtests - - - - - 9 changed files: - + debian/README.test - debian/changelog - debian/docs - debian/examples - + debian/tests/control - + debian/tests/data/README.test_data - + debian/tests/data/R_denitrificans.xml - + debian/tests/data/R_denitrificans_b.xml - + debian/tests/run-unit-test Changes: ===================================== debian/README.test ===================================== @@ -0,0 +1,8 @@ +Notes on how this package can be tested. +──────────────────────────────────────── + +This package can be tested by running the provided test: + + sh run-unit-test + +in order to confirm its integrity. ===================================== debian/changelog ===================================== @@ -1,8 +1,19 @@ cgview (0.0.20100111-5) UNRELEASED; urgency=medium + [ Jelmer Vernooij ] * Use secure copyright file specification URI. - -- Jelmer Vernooij <[email protected]> Sat, 20 Oct 2018 13:37:58 +0000 + [ Steffen Möller ] + * Added ref to conda + * Ooops? Adjusted ref to conda. + + [ Steffen Moeller ] + * d/u/metadata: yamllint + + [ Pranav Ballaney ] + * Add autopkgtests + + -- Pranav Ballaney <[email protected]> Sat, 09 May 2020 10:43:18 +0530 cgview (0.0.20100111-4) unstable; urgency=medium ===================================== debian/docs ===================================== @@ -1 +1,4 @@ README +debian/README.test +debian/tests/run-unit-test +debian/tests/data/README.test_data \ No newline at end of file ===================================== debian/examples ===================================== @@ -2,3 +2,4 @@ api_examples cybercell.xml example_3_features.tab NC_001849.ptt +debian/tests/data/* \ No newline at end of file ===================================== debian/tests/control ===================================== @@ -0,0 +1,3 @@ +Tests: run-unit-test +Depends: @ +Restrictions: allow-stderr ===================================== debian/tests/data/README.test_data ===================================== @@ -0,0 +1,2 @@ +The input files used for testing were generated using cgview_xml_builder.pl +provided along with this package, as described in the corresponding README. \ No newline at end of file ===================================== debian/tests/data/R_denitrificans.xml ===================================== The diff for this file was not included because it is too large. ===================================== debian/tests/data/R_denitrificans_b.xml ===================================== The diff for this file was not included because it is too large. ===================================== debian/tests/run-unit-test ===================================== @@ -0,0 +1,25 @@ +#!/bin/bash +set -e + +pkg=cgview + +export LC_ALL=C.UTF-8 +if [ "${AUTOPKGTEST_TMP}" = "" ] ; then + AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) + # Double quote below to expand the temporary directory variable now versus + # later is on purpose. + # shellcheck disable=SC2064 + trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM +fi + +cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}" + +cd "${AUTOPKGTEST_TMP}" + +gunzip -r * + +cgview -i cybercell.xml -o cybercell.png -f png + +cgview -i R_denitrificans.xml -o R_denitrificans.png -f png + +cgview -i R_denitrificans_b.xml -o R_denitrificans_b.png -f png \ No newline at end of file View it on GitLab: https://salsa.debian.org/med-team/cgview/-/compare/e3e1d985ecb5993b240ae50ba8c42b29972304ce...5d454d2fdc4318e6e6af5f478edc8b1895a1c868 -- View it on GitLab: https://salsa.debian.org/med-team/cgview/-/compare/e3e1d985ecb5993b240ae50ba8c42b29972304ce...5d454d2fdc4318e6e6af5f478edc8b1895a1c868 You're receiving this email because of your account on salsa.debian.org.
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