Andreas Tille pushed to branch master at Debian Med / bcftools
Commits: f6b9f2e2 by Andreas Tille at 2020-06-17T11:24:42+02:00 Depends on Perl demoted to Recommends - - - - - c7d97d8a by Andreas Tille at 2020-06-17T11:24:55+02:00 routine-update: Standards-Version: 4.5.0 - - - - - 342706c3 by Andreas Tille at 2020-06-17T11:24:55+02:00 routine-update: debhelper-compat 13 - - - - - fe05e7ba by Andreas Tille at 2020-06-17T11:24:59+02:00 routine-update: Add salsa-ci file - - - - - 18e12029 by Andreas Tille at 2020-06-17T11:24:59+02:00 routine-update: Rules-Requires-Root: no - - - - - d27a93df by Andreas Tille at 2020-06-17T11:25:01+02:00 debian/copyright: use spaces rather than tabs to start continuation lines. Fixes: lintian: tab-in-license-text See-also: https://lintian.debian.org/tags/tab-in-license-text.html - - - - - ef25c900 by Andreas Tille at 2020-06-17T11:25:07+02:00 Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. Fixes: lintian: upstream-metadata-missing-bug-tracking See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html Fixes: lintian: upstream-metadata-missing-repository See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html - - - - - afc04fe7 by Andreas Tille at 2020-06-17T11:40:28+02:00 Fix Perl recommends - - - - - 46029520 by Andreas Tille at 2020-06-17T11:46:45+02:00 Close bug and upload to unstable - - - - - 5 changed files: - debian/changelog - debian/control - debian/copyright - + debian/salsa-ci.yml - debian/upstream/metadata Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,18 @@ +bcftools (1.10.2-3) unstable; urgency=medium + + * Team upload. + * Depends on Perl demoted to Recommends + Closes: #962834 + * Standards-Version: 4.5.0 (routine-update) + * debhelper-compat 13 (routine-update) + * Add salsa-ci file (routine-update) + * Rules-Requires-Root: no (routine-update) + * debian/copyright: use spaces rather than tabs to start continuation lines. + * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, + Repository-Browse. + + -- Andreas Tille <[email protected]> Wed, 17 Jun 2020 11:41:35 +0200 + bcftools (1.10.2-2) unstable; urgency=medium * Fix build on i386 by using SSE2 ===================================== debian/control ===================================== @@ -3,7 +3,7 @@ Maintainer: Debian Med Packaging Team <[email protected]. Uploaders: Michael R. Crusoe <[email protected]> Section: science Priority: optional -Build-Depends: debhelper-compat (= 12), +Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbz2-dev, liblzma-dev, @@ -11,17 +11,18 @@ Build-Depends: debhelper-compat (= 12), libgsl-dev, tabix <!nocheck>, libio-pty-perl <!nocheck> -Standards-Version: 4.4.1 +Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/bcftools Vcs-Git: https://salsa.debian.org/med-team/bcftools.git Homepage: http://samtools.github.io/bcftools/ +Rules-Requires-Root: no Package: bcftools Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, - ${perl:Depends}, sse2-support [i386] +Recommends: perl Suggests: # These are needed for plot-vcfstats python, ===================================== debian/copyright ===================================== @@ -4,17 +4,17 @@ Source: https://github.com/samtools/bcftools Files: * Copyright: - 2011-2015 Genome Research Ltd. - 2010-2012 Broad Institute + 2011-2015 Genome Research Ltd. + 2010-2012 Broad Institute License: MIT or GPL-3.0 Comment: - Dual-licensing is in effect for the default compilation mode. - When linked with the GPL-licensed GNU Scientific Library - (as is done for this Debian package), the - resulting program must be distributed under the GPL. - . - The source distribution simply states "GPL-licensed" without indicating - a version of the GPL, but includes a copy of GPL-3. + Dual-licensing is in effect for the default compilation mode. + When linked with the GPL-licensed GNU Scientific Library + (as is done for this Debian package), the + resulting program must be distributed under the GPL. + . + The source distribution simply states "GPL-licensed" without indicating + a version of the GPL, but includes a copy of GPL-3. Files: kmin.* Copyright: 2008,2010 Attractive Chaos <[email protected]> ===================================== debian/salsa-ci.yml ===================================== @@ -0,0 +1,4 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml ===================================== debian/upstream/metadata ===================================== @@ -1,3 +1,5 @@ +Bug-Database: https://github.com/samtools/bcftools/issues +Bug-Submit: https://github.com/samtools/bcftools/issues/new Reference: - Author: Petr Danecek and Shane A. McCarthy Title: > @@ -15,3 +17,5 @@ Registry: Entry: bcftools - Name: conda:bioconda Entry: bcftools +Repository: https://github.com/samtools/bcftools.git +Repository-Browse: https://github.com/samtools/bcftools View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/2448bb187e8c4e5809ddc06b85c3b5c33bededea...460295209687734c243be802d3052b31241f3896 -- View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/2448bb187e8c4e5809ddc06b85c3b5c33bededea...460295209687734c243be802d3052b31241f3896 You're receiving this email because of your account on salsa.debian.org.
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