Michael R. Crusoe pushed to branch master at Debian Med / snap-aligner
Commits: c6374c05 by Michael R. Crusoe at 2020-07-09T11:08:18+02:00 update my email address - - - - - 616a8ba6 by Michael R. Crusoe at 2020-07-09T11:11:26+02:00 add upstream repository to metadata - - - - - dbd8ee16 by Michael R. Crusoe at 2020-07-09T11:13:51+02:00 Fixed another spelling error - - - - - 4 changed files: - debian/changelog - debian/control - debian/patches/spelling - debian/upstream/metadata Changes: ===================================== debian/changelog ===================================== @@ -15,7 +15,9 @@ snap-aligner (1.0~beta.18+dfsg-4) unstable; urgency=medium * Remove trailing whitespace in debian/copyright (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) - * Set upstream metadata fields: Bug-Database, Bug-Submit. + * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, + Repository-Browse + * Fixed another spelling error -- Michael R. Crusoe <[email protected]> Thu, 09 Jul 2020 11:00:43 +0200 ===================================== debian/control ===================================== @@ -1,6 +1,6 @@ Source: snap-aligner Maintainer: Debian Med Packaging Team <[email protected]> -Uploaders: Michael R. Crusoe <[email protected]>, +Uploaders: Michael R. Crusoe <[email protected]>, Pranav Ballaney <[email protected]> Section: science Priority: optional ===================================== debian/patches/spelling ===================================== @@ -30,3 +30,14 @@ Forwarded: https://github.com/amplab/snap/pull/66 " following type specifiers (which are case sensitive):\n" " -fastq\n" " -compressedFastq\n" +--- snap-aligner.orig/SNAPLib/GenomeIndex.cpp ++++ snap-aligner/SNAPLib/GenomeIndex.cpp +@@ -1284,7 +1284,7 @@ + WriteErrorMessage("HashTable[%d] has %lld used elements\n",j,(_int64)index->hashTables[j]->GetUsedElementCount()); + } + WriteErrorMessage("IndexBuilder: exceeded size of hash table %d.\n" +- "If you're indexing a non-human genome, make sure not to pass the -hg19 option. Otheriwse, use -exact or increase slack with -h.\n", ++ "If you're indexing a non-human genome, make sure not to pass the -hg19 option. Otherwise, use -exact or increase slack with -h.\n", + whichHashTable); + soft_exit(1); + } ===================================== debian/upstream/metadata ===================================== @@ -1,5 +1,7 @@ Bug-Database: https://github.com/amplab/snap/issues Bug-Submit: https://github.com/amplab/snap/issues/new +Repository-Browse: https://github.com/amplab/snap +Repository: https://github.com/amplab/snap.git Reference: Author: > Matei Zaharia and William J. Bolosky and Kristal Curtis and Armando View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/compare/dbce13f7e84a1ad8f51d322a7be114d7c023a9c3...dbd8ee1605499927403168286d444a4ee8728aec -- View it on GitLab: https://salsa.debian.org/med-team/snap-aligner/-/compare/dbce13f7e84a1ad8f51d322a7be114d7c023a9c3...dbd8ee1605499927403168286d444a4ee8728aec You're receiving this email because of your account on salsa.debian.org.
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