Nilesh Patra pushed to branch master at Debian Med / python-parasail
Commits: b46c4adc by Nilesh Patra at 2020-12-09T01:05:12+05:30 New upstream version 1.2.2 - - - - - 2c466c3e by Nilesh Patra at 2020-12-09T01:05:12+05:30 routine-update: New upstream version - - - - - ae6756a3 by Nilesh Patra at 2020-12-09T01:05:12+05:30 Update upstream source from tag 'upstream/1.2.2' Update to upstream version '1.2.2' with Debian dir f46ab0dcdbae078d877fbca7dc8231413978e8f8 - - - - - d2abd945 by Nilesh Patra at 2020-12-09T01:05:13+05:30 routine-update: Standards-Version: 4.5.1 - - - - - 18e9f754 by Nilesh Patra at 2020-12-09T01:08:09+05:30 Refresh patches - - - - - 5c01174f by Nilesh Patra at 2020-12-09T01:08:31+05:30 routine-update: Ready to upload to unstable - - - - - 7 changed files: - CHANGELOG.rst - debian/changelog - debian/control - debian/patches/find-parasail-so-file-from-system.patch - parasail/__init__.py - + requirements.txt - setup.py Changes: ===================================== CHANGELOG.rst ===================================== @@ -10,6 +10,11 @@ Unreleased_ ----------- The Unreleased section will be empty for tagged releases. Unreleased functionality appears in the develop branch. +------------------- +1.2.2_ - 2020-12-01 +------------------- +- Fix #55 Error installing parasail on macos + ------------------- 1.2.1_ - 2020-11-03 ------------------- @@ -148,7 +153,8 @@ The Unreleased section will be empty for tagged releases. Unreleased functionali ------------------- First tagged release. The 'master' branch always represents the latest stable code. Tagged releases correspond to pypi releases. -.. _Unreleased: https://github.com/jeffdaily/parasail-python/compare/v1.2.1...master +.. _Unreleased: https://github.com/jeffdaily/parasail-python/compare/v1.2.2...master +.. _1.2.2: https://github.com/jeffdaily/parasail-python/compare/v1.2.1...v1.2.2 .. _1.2.1: https://github.com/jeffdaily/parasail-python/compare/v1.2...v1.2.1 .. _1.2: https://github.com/jeffdaily/parasail-python/compare/v1.1.20...v1.2 .. _1.1.20: https://github.com/jeffdaily/parasail-python/compare/v1.1.19...v1.1.20 ===================================== debian/changelog ===================================== @@ -1,3 +1,11 @@ +python-parasail (1.2.2-1) unstable; urgency=medium + + * New upstream version + * Standards-Version: 4.5.1 (routine-update) + * Refresh patch + + -- Nilesh Patra <[email protected]> Wed, 09 Dec 2020 01:08:31 +0530 + python-parasail (1.2.1-1) unstable; urgency=medium * New upstream version ===================================== debian/control ===================================== @@ -11,7 +11,7 @@ Build-Depends: debhelper-compat (= 13), python3-wheel, libparasail-dev, python3-pytest <!nocheck> -Standards-Version: 4.5.0 +Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/python-parasail Vcs-Git: https://salsa.debian.org/med-team/python-parasail.git Homepage: https://github.com/jeffdaily/parasail-python ===================================== debian/patches/find-parasail-so-file-from-system.patch ===================================== @@ -4,15 +4,7 @@ Last-Update: Thu, 23 Apr 2020 01:41:10 +0530 --- a/setup.py +++ b/setup.py -@@ -422,7 +422,6 @@ - - class bdist_wheel(bdist_wheel_): - def run(self): -- prepare_shared_lib() - bdist_wheel_.run(self) - - def finalize_options(self): -@@ -433,7 +432,6 @@ +@@ -421,7 +421,6 @@ class install(install_): def run(self): @@ -20,3 +12,11 @@ Last-Update: Thu, 23 Apr 2020 01:41:10 +0530 install_.run(self) +@@ -431,7 +430,6 @@ + from wheel.bdist_wheel import bdist_wheel as bdist_wheel_ + class bdist_wheel(bdist_wheel_): + def run(self): +- prepare_shared_lib() + bdist_wheel_.run(self) + + def finalize_options(self): ===================================== parasail/__init__.py ===================================== @@ -6,7 +6,7 @@ import sys import numpy -__version__ = "1.2.1" +__version__ = "1.2.2" __title__ = "parasail" __description__ = "pairwise sequence alignment library" __uri__ = "https://github.com/jeffdaily/parasail-python"; ===================================== requirements.txt ===================================== @@ -0,0 +1 @@ +numpy ===================================== setup.py ===================================== @@ -15,7 +15,6 @@ import zipfile from distutils.util import get_platform from setuptools import setup -from wheel.bdist_wheel import bdist_wheel as bdist_wheel_ from setuptools.command.install import install as install_ ############################################################################### @@ -47,7 +46,7 @@ CLASSIFIERS = [ "Topic :: Scientific/Engineering :: Bio-Informatics", "Topic :: Software Development :: Libraries :: Python Modules", ] -INSTALL_REQUIRES = ["numpy", "wheel"] +INSTALL_REQUIRES = ["numpy"] ############################################################################### @@ -420,17 +419,6 @@ def prepare_shared_lib(): if not os.path.exists(libpath): raise RuntimeError("Unable to find shared library {}.".format(libname)) -class bdist_wheel(bdist_wheel_): - def run(self): - prepare_shared_lib() - bdist_wheel_.run(self) - - def finalize_options(self): - bdist_wheel_.finalize_options(self) - self.universal = True - self.plat_name_supplied = True - self.plat_name = get_platform() - class install(install_): def run(self): prepare_shared_lib() @@ -438,6 +426,23 @@ class install(install_): if __name__ == "__main__": + cmdclass = {} + try: + from wheel.bdist_wheel import bdist_wheel as bdist_wheel_ + class bdist_wheel(bdist_wheel_): + def run(self): + prepare_shared_lib() + bdist_wheel_.run(self) + + def finalize_options(self): + bdist_wheel_.finalize_options(self) + self.universal = True + self.plat_name_supplied = True + self.plat_name = get_platform() + cmdclass = {'bdist_wheel': bdist_wheel, 'install': install} + except ImportError: + cmdclass = {'install': install} + long_description = "" try: long_description = open("README.rst", encoding="utf8").read() @@ -457,7 +462,7 @@ if __name__ == "__main__": keywords=KEYWORDS, packages=PACKAGES, package_data={"parasail": [get_libname()]}, - cmdclass={'bdist_wheel': bdist_wheel, 'install': install}, + cmdclass=cmdclass, zip_safe=False, classifiers=CLASSIFIERS, install_requires=INSTALL_REQUIRES, View it on GitLab: https://salsa.debian.org/med-team/python-parasail/-/compare/781a7f2b8c725af25091bb7bde5eddacd55bf39a...5c01174fbf5090e3b75d351008b75f57f2a0aac4 -- View it on GitLab: https://salsa.debian.org/med-team/python-parasail/-/compare/781a7f2b8c725af25091bb7bde5eddacd55bf39a...5c01174fbf5090e3b75d351008b75f57f2a0aac4 You're receiving this email because of your account on salsa.debian.org.
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