Michael R. Crusoe pushed to branch upstream at Debian Med / picard-tools
Commits: a51591b3 by Michael R. Crusoe at 2021-01-07T13:41:43+01:00 New upstream version 2.24.0+dfsg - - - - - 30 changed files: - src/main/java/picard/analysis/AlignmentSummaryMetrics.java - src/main/java/picard/analysis/AlignmentSummaryMetricsCollector.java - src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java - src/main/java/picard/analysis/CollectBaseDistributionByCycle.java - src/main/java/picard/analysis/CollectGcBiasMetrics.java - src/main/java/picard/analysis/CollectInsertSizeMetrics.java - src/main/java/picard/analysis/CollectMultipleMetrics.java - src/main/java/picard/analysis/CollectRnaSeqMetrics.java - src/main/java/picard/analysis/CollectRrbsMetrics.java - src/main/java/picard/analysis/CollectWgsMetrics.java - src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java - src/main/java/picard/analysis/MeanQualityByCycle.java - src/main/java/picard/analysis/QualityScoreDistribution.java - src/main/java/picard/analysis/directed/PanelMetricsBase.java - src/main/java/picard/analysis/directed/TargetMetricsCollector.java - src/main/java/picard/analysis/replicates/CollectIndependentReplicateMetrics.java - src/main/java/picard/arrays/GtcToVcf.java - src/main/java/picard/cmdline/CommandLineProgram.java - − src/main/java/picard/illumina/parser/ClusterIntensityFileReader.java - − src/main/java/picard/illumina/parser/FourChannelIntensityData.java - src/main/java/picard/illumina/parser/IlluminaData.java - src/main/java/picard/illumina/parser/ReadData.java - src/main/java/picard/sam/BuildBamIndex.java - src/main/java/picard/sam/SamErrorMetric/CollectSamErrorMetrics.java - src/main/java/picard/sam/SamErrorMetric/ReadBaseStratification.java - src/main/java/picard/sam/ValidateSamFile.java - src/main/java/picard/sam/util/PhysicalLocation.java - src/main/java/picard/sam/util/ReadNameParser.java - src/main/java/picard/util/IntervalListTools.java - src/main/java/picard/vcf/MendelianViolations/FindMendelianViolations.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/commit/a51591b391fe3a248a9e1ddc74a654c204764350 -- View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/commit/a51591b391fe3a248a9e1ddc74a654c204764350 You're receiving this email because of your account on salsa.debian.org.
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