Shruti Sridhar pushed to branch master at Debian Med / changeo
Commits: 8c63c89c by Shruti Sridhar at 2021-03-20T22:51:30+05:30 Remove data and extra binary, use multi-orig tarball - - - - - 3a2ed201 by Shruti Sridhar at 2021-03-20T23:03:17+05:30 New upstream version 1.0.2 - - - - - dd5c4eeb by Shruti Sridhar at 2021-03-20T23:03:20+05:30 Update upstream source from tag 'upstream/1.0.2' Update to upstream version '1.0.2' with Debian dir 16f468b6a1c3060d14075a1582c32fe8907dce69 - - - - - f89d9636 by Shruti Sridhar at 2021-03-29T22:20:29+05:30 Fix autopkgtest - - - - - e9564263 by Shruti Sridhar at 2021-03-29T22:22:12+05:30 Update changelog - - - - - 9 changed files: - debian/tests/data/IMGT_Human_IGHD.fasta → debian-tests-data/IMGT_Human_IGHD.fasta - debian/tests/data/IMGT_Human_IGHJ.fasta → debian-tests-data/IMGT_Human_IGHJ.fasta - debian/tests/data/IMGT_Human_IGHV.fasta → debian-tests-data/IMGT_Human_IGHV.fasta - debian/tests/data/S43_atleast-2.fasta → debian-tests-data/S43_atleast-2.fasta - debian/tests/data/S43_atleast-2.txz → debian-tests-data/S43_atleast-2.txz - debian/changelog - − debian/examples - + debian/gbp.conf - debian/tests/run-unit-test Changes: ===================================== debian/tests/data/IMGT_Human_IGHD.fasta → debian-tests-data/IMGT_Human_IGHD.fasta ===================================== ===================================== debian/tests/data/IMGT_Human_IGHJ.fasta → debian-tests-data/IMGT_Human_IGHJ.fasta ===================================== ===================================== debian/tests/data/IMGT_Human_IGHV.fasta → debian-tests-data/IMGT_Human_IGHV.fasta ===================================== ===================================== debian/tests/data/S43_atleast-2.fasta → debian-tests-data/S43_atleast-2.fasta ===================================== ===================================== debian/tests/data/S43_atleast-2.txz → debian-tests-data/S43_atleast-2.txz ===================================== ===================================== debian/changelog ===================================== @@ -10,7 +10,19 @@ changeo (1.0.2-1) UNRELEASED; urgency=medium * Add autopkgtests. Closes #970597 * Install docs - -- Shruti Sridhar <[email protected]> Fri, 19 Mar 2021 21:40:12 +0530 + [ Nilesh Patra ] + * Update email + + [ Shruti Sridhar ] + * Install example and reference data + * Add autopkgtests + * Install docs + * Update changelog + * Remove data and extra binary, use multi-orig tarball + * New upstream version 1.0.2 + * Fix autopkgtest + + -- Shruti Sridhar <[email protected]> Mon, 29 Mar 2021 22:20:49 +0530 changeo (1.0.2-1) unstable; urgency=medium ===================================== debian/examples deleted ===================================== @@ -1 +0,0 @@ -debian/tests/data/* \ No newline at end of file ===================================== debian/gbp.conf ===================================== @@ -0,0 +1,4 @@ +[DEFAULT] +pristine-tar=True +filter=[ '.gitignore', '.travis.yml', '.git*' ] +component=['debian-tests-data'] \ No newline at end of file ===================================== debian/tests/run-unit-test ===================================== @@ -1,17 +1,19 @@ #!/bin/bash set -e -pkg=changeo +pkg=stringtie +CUR_DIR=`pwd` -export LC_ALL=C.UTF-8 if [ "${AUTOPKGTEST_TMP}" = "" ] ; then AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM fi -cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}" +cp ${CUR_DIR}/debian-tests-data/* -a "${AUTOPKGTEST_TMP}" cd "${AUTOPKGTEST_TMP}" +gunzip -r * + MakeDb.py imgt -i S43_atleast-2.txz -s S43_atleast-2.fasta echo "025d331569cf3959735d1677ad1532d9 S43_atleast-2_db-pass.tsv" >> checksums View it on GitLab: https://salsa.debian.org/med-team/changeo/-/compare/2e372174f9697abcf31b9780b0ee8c97247ac3c9...e95642638ac52e7c6759f45d6dd0d170bf1bb1f4 -- View it on GitLab: https://salsa.debian.org/med-team/changeo/-/compare/2e372174f9697abcf31b9780b0ee8c97247ac3c9...e95642638ac52e7c6759f45d6dd0d170bf1bb1f4 You're receiving this email because of your account on salsa.debian.org.
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