Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
9cbfc87b by Andreas Tille at 2021-05-16T13:42:18+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,48 +1,47 @@
-Last-Update: Sun, 16 May 2021 01:42:03 +0000
+Last-Update: Sun, 16 May 2021 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 181 | {covid-19,imaging}
|
orthanc | 96 | {practice,imaging,covid-19}
|
- gdcm | 51 | {imaging-dev}
|
orthanc-wsi | 50 |
{imaging,laboratory,practice,his,covid-19,oncology} |
- amide | 34 | {imaging}
|
+ gdcm | 48 | {imaging-dev}
|
+ amide | 33 | {imaging}
|
nipype | 30 | {imaging-dev,imaging}
|
dicom3tools | 29 | {imaging}
|
htsjdk | 28 | {bio-dev}
|
- dicomscope | 25 | {imaging}
|
- dcm2niix | 21 | {imaging}
|
+ dicomscope | 24 | {imaging}
|
+ dcm2niix | 22 | {imaging}
|
openslide | 21 | {imaging}
|
- gdcm | 19 | {covid-19,imaging}
|
- gdcm | 19 | {imaging-dev}
|
+ gdcm | 20 | {imaging-dev}
|
+ gdcm | 20 | {covid-19,imaging}
|
odin | 18 | {imaging-dev,imaging}
|
gnumed-server | 17 | {covid-19,practice}
|
- ngs-sdk | 16 | {bio-dev}
|
pixelmed | 16 | {imaging}
|
invesalius | 15 | {imaging}
|
- minc-tools | 15 | {imaging}
|
- nifticlib | 15 | {imaging}
|
- dicomnifti | 13 | {imaging}
|
+ ngs-sdk | 15 | {bio-dev}
|
+ minc-tools | 13 | {imaging}
|
+ nifticlib | 13 | {imaging}
|
orthanc-webviewer | 13 | {imaging}
|
+ dicomnifti | 12 | {imaging}
|
insighttoolkit4 | 12 | {imaging-dev}
|
plastimatch | 11 | {imaging}
|
vtk-dicom | 10 | {imaging}
|
king | 9 | {imaging,typesetting}
|
mia | 9 | {imaging}
|
ngs-sdk | 9 | {bio-dev}
|
- adun.app | 8 | {bio}
|
ngs-sdk | 8 | {bio-dev}
|
- nifti2dicom | 8 | {imaging}
|
+ adun.app | 7 | {bio}
|
bamkit | 7 | {covid-19,bio}
|
dicompyler | 7 | {oncology}
|
openslide | 7 | {imaging-dev}
|
+ nifti2dicom | 6 | {imaging}
|
orthanc-dicomweb | 6 | {imaging,covid-19}
|
bart-view | 5 | {imaging}
|
libminc | 5 | {imaging-dev}
|
orthanc-mysql | 5 | {imaging}
|
orthanc-postgresql | 5 | {imaging}
|
salmid | 5 | {bio}
|
- staden | 5 | {bio}
|
busco | 4 | {covid-19,bio}
|
jebl2 | 4 | {bio-dev}
|
librg-utils-perl | 4 | {bio}
|
@@ -50,6 +49,7 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
pymia | 4 | {imaging-dev}
|
salmon | 4 | {bio,covid-19}
|
stacks | 4 | {bio}
|
+ staden | 4 | {bio}
|
treeview | 4 | {bio,bio-phylogeny}
|
blasr | 3 | {bio-ngs,bio}
|
ea-utils | 3 | {bio}
|
@@ -58,7 +58,6 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
getdata | 3 | {bio}
|
jellyfish1 | 3 | {bio}
|
nifticlib | 3 | {imaging-dev}
|
- opencfu | 3 | {laboratory}
|
oscar | 3 | {data,practice,tools}
|
plasmidid | 3 | {covid-19,bio}
|
blimps | 2 | {bio}
|
@@ -69,6 +68,7 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
libdivsufsort | 2 | {bio-dev}
|
libsbml | 2 | {bio-dev}
|
obitools | 2 | {bio}
|
+ opencfu | 2 | {laboratory}
|
orthanc-gdcm | 2 | {imaging}
|
papyrus | 2 | {imaging-dev}
|
pbdagcon | 2 | {bio}
|
@@ -85,20 +85,19 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
anfo | 1 | {cloud,bio}
|
beast-mcmc | 1 | {bio,bio-phylogeny}
|
biojava-live | 1 | {bio-dev}
|
+ biomaj3-cli | 1 | {cloud}
|
bio-tradis | 1 | {bio-dev,bio}
|
bitseq | 1 | {bio}
|
brig | 1 | {bio}
|
cat-bat | 1 | {bio,covid-19}
|
ctn | 1 | {imaging-dev}
|
cufflinks | 1 | {cloud,bio}
|
- eegdev | 1 | {imaging-dev}
|
estscan | 1 | {bio}
|
fsm-lite | 1 | {bio}
|
ghmm | 1 | {bio}
|
lamarc | 1 | {bio}
|
libctapimkt | 1 | {practice}
|
libmuscle | 1 | {bio-dev}
|
- libpal-java | 1 | {bio-dev}
|
metaphlan2 | 1 | {bio}
|
orthanc-python | 1 | {covid-19}
|
paraclu | 1 | {bio,cloud}
|
@@ -113,14 +112,12 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
suitename | 1 | {bio}
|
varna | 1 | {bio}
|
vienna-rna | 1 | {covid-19,bio}
|
- vtk-dicom | 1 | {imaging-dev}
|
arden | 0 | {bio,cloud}
|
assemblytics | 0 | {bio}
|
atropos | 0 | {bio}
|
bambamc | 0 | {bio-dev}
|
bbmap | 0 | {bio,covid-19}
|
biojava4-live | 0 | {bio-dev}
|
- biomaj3-cli | 0 | {cloud}
|
biosyntax | 0 | {bio}
|
bmtk | 0 | {psychology}
|
bustools | 0 | {bio,covid-19}
|
@@ -130,12 +127,13 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
clonalorigin | 0 | {bio}
|
delly | 0 | {bio,covid-19}
|
dextractor | 0 | {covid-19,bio}
|
+ eegdev | 0 | {imaging-dev}
|
emboss-explorer | 0 | {bio}
|
emmax | 0 | {bio}
|
fastml | 0 | {bio}
|
fis-gtm | 0 | {his}
|
- gatb-core | 0 | {bio-dev}
|
gatb-core | 0 | {bio}
|
+ gatb-core | 0 | {bio-dev}
|
gifticlib | 0 | {imaging-dev}
|
hinge | 0 | {bio}
|
htscodecs | 0 | {covid-19,bio-dev}
|
@@ -164,8 +162,9 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
libmaus2 | 0 | {bio-dev,covid-19}
|
libmems | 0 | {bio-dev}
|
libmialm | 0 | {imaging-dev}
|
- libncl | 0 | {bio-dev}
|
libncl | 0 | {bio}
|
+ libncl | 0 | {bio-dev}
|
+ libpal-java | 0 | {bio-dev}
|
libpsortb | 0 | {bio-dev}
|
libqes | 0 | {bio-dev}
|
librdp-taxonomy-tree-java | 0 | {bio-dev}
|
@@ -233,6 +232,7 @@ Last-Update: Sun, 16 May 2021 01:42:03 +0000
trace2dbest | 0 | {bio}
|
tvc | 0 | {bio}
|
varscan | 0 | {covid-19,bio}
|
+ vtk-dicom | 0 | {imaging-dev}
|
xdffileio | 0 | {imaging-dev}
|
yaha | 0 | {bio}
|
yanagiba | 0 | {bio,covid-19}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9cbfc87b2e05f7c255b3ff91a013033dcfb18714
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9cbfc87b2e05f7c255b3ff91a013033dcfb18714
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