Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
da11dc12 by Andreas Tille at 2021-05-23T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,62 +1,63 @@
-Last-Update: Sun, 23 May 2021 01:42:03 +0000
+Last-Update: Sun, 23 May 2021 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 182 | {covid-19,imaging}
|
+ dcmtk | 183 | {covid-19,imaging}
|
orthanc | 96 | {practice,imaging,covid-19}
|
- gdcm | 53 | {imaging-dev}
|
- orthanc-wsi | 49 |
{imaging,laboratory,practice,his,covid-19,oncology} |
- amide | 30 | {imaging}
|
+ gdcm | 55 | {imaging-dev}
|
+ orthanc-wsi | 50 |
{imaging,laboratory,practice,his,covid-19,oncology} |
nipype | 30 | {imaging-dev,imaging}
|
- dicom3tools | 29 | {imaging}
|
+ amide | 29 | {imaging}
|
+ dicom3tools | 28 | {imaging}
|
htsjdk | 28 | {bio-dev}
|
dicomscope | 26 | {imaging}
|
dcm2niix | 23 | {imaging}
|
gdcm | 21 | {covid-19,imaging}
|
gdcm | 20 | {imaging-dev}
|
- openslide | 19 | {imaging}
|
+ openslide | 18 | {imaging}
|
odin | 17 | {imaging-dev,imaging}
|
- gnumed-server | 16 | {covid-19,practice}
|
- minc-tools | 15 | {imaging}
|
+ gnumed-server | 15 | {covid-19,practice}
|
ngs-sdk | 15 | {bio-dev}
|
invesalius | 14 | {imaging}
|
- nifticlib | 14 | {imaging}
|
+ minc-tools | 14 | {imaging}
|
orthanc-webviewer | 14 | {imaging}
|
pixelmed | 14 | {imaging}
|
- dicomnifti | 13 | {imaging}
|
+ nifticlib | 13 | {imaging}
|
+ dicomnifti | 12 | {imaging}
|
+ ngs-sdk | 11 | {bio-dev}
|
plastimatch | 11 | {imaging}
|
- ngs-sdk | 10 | {bio-dev}
|
vtk-dicom | 10 | {imaging}
|
insighttoolkit4 | 9 | {imaging-dev}
|
king | 9 | {imaging,typesetting}
|
mia | 9 | {imaging}
|
- openslide | 9 | {imaging-dev}
|
- nifti2dicom | 8 | {imaging}
|
+ openslide | 8 | {imaging-dev}
|
adun.app | 7 | {bio}
|
bamkit | 7 | {covid-19,bio}
|
dicompyler | 7 | {oncology}
|
ngs-sdk | 7 | {bio-dev}
|
nifti2dicom | 7 | {imaging}
|
+ nifti2dicom | 6 | {imaging}
|
orthanc-dicomweb | 6 | {imaging,covid-19}
|
bart-view | 5 | {imaging}
|
busco | 5 | {covid-19,bio}
|
+ libminc | 5 | {imaging-dev}
|
melting | 5 | {bio,cloud}
|
orthanc-mysql | 5 | {imaging}
|
orthanc-postgresql | 5 | {imaging}
|
salmid | 5 | {bio}
|
jebl2 | 4 | {bio-dev}
|
- libminc | 4 | {imaging-dev}
|
librg-utils-perl | 4 | {bio}
|
+ oscar | 4 | {data,practice,tools}
|
salmon | 4 | {bio,covid-19}
|
- stacks | 4 | {bio}
|
treeview | 4 | {bio,bio-phylogeny}
|
elastix | 3 | {imaging}
|
getdata | 3 | {bio}
|
jellyfish1 | 3 | {bio}
|
lagan | 3 | {bio}
|
- oscar | 3 | {data,practice,tools}
|
+ nifticlib | 3 | {imaging-dev}
|
pymia | 3 | {imaging-dev}
|
runcircos-gui | 3 | {bio}
|
+ stacks | 3 | {bio}
|
staden | 3 | {bio}
|
tracetuner | 3 | {bio}
|
biojava-live | 2 | {bio-dev}
|
@@ -72,7 +73,6 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
ghmm | 2 | {bio}
|
lamarc | 2 | {bio}
|
libsbml | 2 | {bio-dev}
|
- nifticlib | 2 | {imaging-dev}
|
obitools | 2 | {bio}
|
orthanc-gdcm | 2 | {imaging}
|
papyrus | 2 | {imaging-dev}
|
@@ -99,6 +99,7 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
libctapimkt | 1 | {practice}
|
libdivsufsort | 1 | {bio-dev}
|
libncl | 1 | {bio}
|
+ libvistaio | 1 | {imaging-dev}
|
logol | 1 | {bio}
|
mauve-aligner | 1 | {bio}
|
metaphlan2 | 1 | {bio}
|
@@ -116,6 +117,7 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
quorum | 1 | {bio}
|
rambo-k | 1 | {bio}
|
saint | 1 | {bio}
|
+ samtools-legacy | 1 | {bio-dev}
|
segemehl | 1 | {bio}
|
sibsim4 | 1 | {cloud,bio}
|
simpleitk | 1 | {imaging-dev}
|
@@ -173,7 +175,6 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
librdp-taxonomy-tree-java | 0 | {bio-dev}
|
libseqlib | 0 | {bio-dev}
|
libstatgen | 0 | {bio-dev}
|
- libvistaio | 0 | {imaging-dev}
|
libxdf | 0 | {imaging-dev}
|
metastudent-data | 0 | {bio}
|
metastudent-data-2 | 0 | {bio}
|
@@ -199,8 +200,8 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
proalign | 0 | {bio-phylogeny,bio}
|
pscan-chip | 0 | {bio}
|
python-epimodels | 0 | {epi}
|
- python-seqcluster | 0 | {bio}
|
python-seqcluster | 0 | {covid-19,bio-dev}
|
+ python-seqcluster | 0 | {bio}
|
python-wdlparse | 0 | {bio-dev}
|
q2-sample-classifier | 0 | {bio,bio-dev}
|
rdp-alignment | 0 | {bio}
|
@@ -209,7 +210,6 @@ Last-Update: Sun, 23 May 2021 01:42:03 +0000
rtax | 0 | {cloud,bio}
|
sambamba | 0 | {bio}
|
samblaster | 0 | {covid-19,bio}
|
- samtools-legacy | 0 | {bio-dev}
|
sbmltoolbox | 0 | {bio-dev}
|
seq-gen | 0 | {bio}
|
sga | 0 | {bio}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/da11dc12d759098cfd9cd9f362ceff53913077eb
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/da11dc12d759098cfd9cd9f362ceff53913077eb
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