debian-med

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2023/12/20 needs-internet restriction (Was: Bug#1010653: closed ...) (Bug#1010653: fixed in busco 5.5.0-2) Andreas Tille
2023/12/19 [Advent bug squashing] extraneous build dependency in biopython Étienne Mollier
2023/12/18 [Advent bug squashing] Several boost 1.83 transition bugs Étienne Mollier
2023/12/17 [Advent bug squashing] Bug #1048044 Étienne Mollier
2023/12/16 [Advent bug squashing] Bug #1058054 affecting python-sorted-nearest Étienne Mollier
2023/12/15 Re: [Advent bug squashing] Bugs #1058252, #1043881, #1044949 and #1049574 Étienne Mollier
2023/12/15 [Advent bug squashing] Bugs #1058252, #1043881, #1044949 and #1049574 Étienne Mollier
2023/12/14 [Advent bug squashing] various bugs Étienne Mollier
2023/12/14 [Advent bug squashing] Bug #1058683 : incompatibility between igv and htsjdk Pierre Gruet
2023/12/13 Re: [Advent bug squashing] Bug#1058394: marked as done (augur: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13)] Étienne Mollier
2023/12/13 [Advent bug squashing] Bug#1058394: marked as done (augur: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13)] Étienne Mollier
2023/12/13 Re: Thanks a lot [[email protected]: ugene_49.1+dfsg-1_amd64.changes ACCEPTED into unstable] Andreas Tille
2023/12/12 Re: Pique #986194 Bug closing Tony Travis
2023/12/12 Re: Pique #986194 Bug closing Tony Travis
2023/12/12 Re: Thanks a lot [[email protected]: ugene_49.1+dfsg-1_amd64.changes ACCEPTED into unstable] Pierre Gruet
2023/12/12 Pique #986194 Bug closing Komolehin Israel
2023/12/12 Thanks a lot [[email protected]: ugene_49.1+dfsg-1_amd64.changes ACCEPTED into unstable] Andreas Tille
2023/12/11 Re: bart version 0.9.00 tony mancill
2023/12/11 Re: bart version 0.9.00 tony mancill
2023/12/11 Re: bart version 0.9.00 Martin Uecker
2023/12/11 Re: Bug#1043240: transition: pandas 1.5 -> 2.1 Matthias Klose
2023/12/11 Re: Bug#1043240: transition: pandas 1.5 -> 2.1 Thomas Goirand
2023/12/11 Re: pandas 1.5 -> 2.1? Julian Gilbey
2023/12/10 Re: Attempt to upgrade sra-sdk Andreas Tille
2023/12/10 Re: Bug#1043240: transition: pandas 1.5 -> 2.1 Matthias Klose
2023/12/10 Re: bart version 0.9.00 tony mancill
2023/12/10 bart version 0.9.00 Martin Uecker
2023/12/10 Re: pandas 1.5 -> 2.1? Drew Parsons
2023/12/10 Re: Attempt to upgrade sra-sdk Aaron M. Ucko
2023/12/10 pandas 1.5 -> 2.1? Kingsley G. Morse Jr.
2023/12/10 Re: Bug#1043240: transition: pandas 1.5 -> 2.1 Julian Gilbey
2023/12/10 Bug#1043240: transition: pandas 1.5 -> 2.1 Rebecca N. Palmer
2023/12/10 Re: Attempt to upgrade sra-sdk Andreas Tille
2023/12/09 Re: Attempt to upgrade sra-sdk Aaron M. Ucko
2023/12/09 Attempt to upgrade sra-sdk Andreas Tille
2023/12/09 Upgrading fis-gtm and closing CVE-2021-44496 CVE-2021-44504 Andreas Tille
2023/12/08 Debian Med video meeting tomorrow Saturday 2023-12-09 19:00 UTC Andreas Tille
2023/12/08 [Advent bug squashing] 5 more minor bugs Lin Qigang
2023/12/07 Re: [Advent bug squashing] double source build failures #1043957 and #1047043 Étienne Mollier
2023/12/06 Re: [Advent bug squashing] double source build failures #1043957 and #1047043 Emmanuel . Promayon
2023/12/06 Wrong calls of snpEff in snippy (Was: Could some SnpEff user from the community please ping authors) Andreas Tille
2023/12/06 Re: Could some SnpEff user from the community please ping authors Andreas Tille
2023/12/05 Re: Could some SnpEff user from the community please ping authors Pierre Gruet
2023/12/05 Re: Could some SnpEff user from the community please ping authors Nilesh Patra
2023/12/05 [Advent bug squashing] Bug#1015486 with LTO, plus 1046793, 1047333 and 1049134 closed Étienne Mollier
2023/12/05 [Advent bug squashing] Fails to build source after successful build #1046452 and #1046140 Lin Qigang
2023/12/04 [Advent bug squashing] double source build failures #1043957 and #1047043 Étienne Mollier
2023/12/04 [Advent bug squashing] Bug#1053509: marked as done (shasta: autopkgtest regression on arm64: is memory suddenly not enough?) Étienne Mollier
2023/12/03 Re: [Advent bug squashing] 9 bugs + 1 bug = 10 bugs Andreas Tille
2023/12/03 [Advent bug squashing] #1048281, #1046135 and #1015668 Étienne Mollier
2023/12/03 Re: [Advent bug squashing] 9 bugs + 1 bug = 10 bugs Étienne Mollier
2023/12/03 Re: [Advent bug squashing] 9 bugs + 1 bug = 10 bugs Andreas Tille
2023/12/03 [Advent bug squashing] #1057132 and #1057253 done Andreas Tille
2023/12/03 [Advent bug squashing] 9 bugs + 1 bug = 10 bugs Étienne Mollier
2023/12/03 [Advent bug squashing] 9 bugs Pierre Gruet
2023/12/02 [Advent bug squashing] eegdev_0.2-8_source.changes ACCEPTED into unstable Étienne Mollier
2023/12/01 [Advent bug squashing] Bug#1057127: marked as done (jellyfish1: add support for loongarch64 in d/control) Andreas Tille
2023/12/01 December is bug squashing month Andreas Tille
2023/11/28 Could some SnpEff user from the community please ping authors Andreas Tille
2023/11/27 Re: genomicsdb not migrating and new upstream version Pierre Gruet
2023/11/27 genomicsdb not migrating and new upstream version Andreas Tille
2023/11/20 Last call for any other location than Berlin (Was: Any suggestions for next Debian Med sprint (in person meeting)?) Andreas Tille
2023/11/20 Re: Any suggestions for next Debian Med sprint (in person meeting)? Sascha Steinbiss
2023/11/16 Re: Any suggestions for next Debian Med sprint (in person meeting)? Andreas Tille
2023/11/16 Aw: Re: Any suggestions for next Debian Med sprint (in person meeting)? Steffen Möller
2023/11/13 Re: Any suggestions for next Debian Med sprint (in person meeting)? Sascha Steinbiss
2023/11/11 Re: Any suggestions for next Debian Med sprint (in person meeting)? Nilesh Patra
2023/11/10 Debian Med video meeting tomorrow Saturday 2023-11-11 19:00 UTC Andreas Tille
2023/11/10 Re: Any suggestions for next Debian Med sprint (in person meeting)? Andreas Tille
2023/11/10 Re: Any suggestions for next Debian Med sprint (in person meeting)? Pierre Gruet
2023/11/09 Re: migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/08 Re: migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/08 Re: migration to htslib ecosystem 1.18 Andreas Tille
2023/11/08 Re: migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/08 Re: migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/08 Re: migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/08 Re: migration to htslib ecosystem 1.18 Andreas Tille
2023/11/08 Re: migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/08 Re: migration to htslib ecosystem 1.18 Andreas Tille
2023/11/07 Re: migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/07 Re: Adding autopkgtest to Orthanc-python Sébastien Jodogne
2023/11/07 Re: migration to htslib ecosystem 1.18 Andreas Tille
2023/11/06 Re: Adding autopkgtest to Orthanc-python Nilesh Patra
2023/11/06 migration to htslib ecosystem 1.18 Étienne Mollier
2023/11/04 Re: Adding autopkgtest to Orthanc-python Nilesh Patra
2023/11/04 Re: Adding autopkgtest to Orthanc-python Sébastien Jodogne
2023/11/04 Re: Adding autopkgtest to Orthanc-python Nilesh Patra
2023/11/02 Any suggestions for next Debian Med sprint (in person meeting)? Andreas Tille
2023/11/02 Re: canu Tony Travis
2023/11/02 Re: canu George Marselis
2023/11/01 Re: canu Andreas Tille
2023/11/01 Re: canu Andreas Tille
2023/11/01 Re: canu Tony Travis
2023/10/31 Re: canu Andreas Tille
2023/10/31 Re: Orthanc Integration Test using Orthanc-wsi Andreas Tille
2023/10/31 canu Tony Travis
2023/10/31 Re: Adding autopkgtest to Orthanc-python Sébastien Jodogne
2023/10/31 Re: Orthanc Integration Test using Orthanc-wsi Sébastien Jodogne
2023/10/20 Re: Adding autopkgtest to Orthanc-python Aaron M. Ucko
2023/10/20 Orthanc Integration Test using Orthanc-wsi Komolehin Israel
2023/10/20 Re: Use of "UNRELEASED" in debian/changelog Nilesh Patra
2023/10/20 Re: Use of "UNRELEASED" in debian/changelog Andreas Tille
2023/10/20 Re: Use of "UNRELEASED" in debian/changelog Andreas Tille
2023/10/20 Re: Use of "UNRELEASED" in debian/changelog Santiago Vila
2023/10/20 Re: Use of "UNRELEASED" in debian/changelog Nilesh Patra
2023/10/20 Re: Adding autopkgtest to Orthanc-python Andreas Tille
2023/10/20 Use of "UNRELEASED" in debian/changelog Santiago Vila
2023/10/20 Adding autopkgtest to Orthanc-python Oyindamola Olatunji
2023/10/19 Re: Java help for bbmap needed Andreas Tille
2023/10/19 Re: Java help for bbmap needed Pierre Gruet
2023/10/19 Re: Bug#1053265: dipy: test_icm_square test fails since exact equality used with floating point numbers Andreas Tille
2023/10/18 Java help for bbmap needed Andreas Tille
2023/10/18 General remarks for writing autopkgtests Andreas Tille
2023/10/14 Re: Fixed? Re: video meeting technical issues Andreas Tille
2023/10/14 Fixed? Re: video meeting technical issues Rebecca N. Palmer
2023/10/13 Debian Med video meeting tomorrow Saturday 2023-10-14 19:00 UTC Andreas Tille
2023/10/01 Re: Passing on maintenance of node-shiny-server dependencies Andrius Merkys
2023/09/29 [[email protected]: Accepted Outreachy intern project: Quality assurance for biological and medical applications inside Debian] Andreas Tille
2023/09/28 Re: Lets start video meetings in October again (Was: "Poll" for video conference date) Étienne Mollier
2023/09/28 Re: Passing on maintenance of node-shiny-server dependencies Nilesh Patra
2023/09/28 Lets start video meetings in October again (Was: "Poll" for video conference date) Andreas Tille
2023/09/28 Passing on maintenance of node-shiny-server dependencies Andrius Merkys
2023/09/26 Re: [hamap] Changing HAMAP license to match UniProt (CC-BY-4.0)? Michael R. Crusoe
2023/09/16 Re: libcifpp updated, new soname, review requested Étienne Mollier
2023/09/15 Re: libcifpp updated, new soname, review requested Étienne Mollier
2023/09/15 Re: libcifpp updated, new soname, review requested Étienne Mollier
2023/09/14 Bug#1051939: ITP: ubpm - Universal Blood Pressure Manager Steven Robbins
2023/09/14 libcifpp updated, new soname, review requested Maarten L. Hekkelman
2023/09/12 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree Étienne Mollier
2023/09/12 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree César Pomar
2023/09/11 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree Étienne Mollier
2023/09/11 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree César Pomar
2023/09/10 Re: What is the point of B-D-I in a package that has no arch:any component? Andreas Tille
2023/09/10 Re: What is the point of B-D-I in a package that has no arch:any component? tony mancill
2023/09/08 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree Étienne Mollier
2023/09/07 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree César Pomar
2023/09/04 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree Andreas Tille
2023/09/04 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree César Pomar
2023/09/01 Re: New CamiTK 5.1.0 release Pierre Gruet
2023/09/01 Re: help wanted Maarten L. Hekkelman
2023/08/31 Re: help wanted Nilesh Patra
2023/08/31 Re: help wanted Andreas Tille
2023/08/31 Re: help wanted Maarten L. Hekkelman
2023/08/31 Re: help wanted Andreas Tille
2023/08/31 Re: help wanted Maarten L. Hekkelman
2023/08/31 Re: help wanted Andreas Tille
2023/08/31 Re: help wanted Maarten L. Hekkelman
2023/08/31 Re: help wanted Andreas Tille
2023/08/31 help wanted Maarten L. Hekkelman
2023/08/29 Re: New CamiTK 5.1.0 release Emmanuel Promayon
2023/08/25 Re: New CamiTK 5.1.0 release Pierre Gruet
2023/08/25 Re: Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Nilesh Patra
2023/08/25 Re: Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Jeremy Sowden
2023/08/25 Re: Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Niels Thykier
2023/08/25 Re: Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Nilesh Patra
2023/08/25 Re: Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Niels Thykier
2023/08/25 Re: Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Niels Thykier
2023/08/25 Re: Volunteer request RAKESH TIWARI
2023/08/25 Re: Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Nilesh Patra
2023/08/25 Re: Volunteer request Pierre Gruet
2023/08/25 Re: Volunteer request Andreas Tille
2023/08/25 Re: Volunteer request Nilesh Patra
2023/08/25 Flex help needed for eegdev (Was: Re: eegdev: FTBFS: ../../lib/stdio.h:64:3: error: #error "Please include config.h first.") Nilesh Patra
2023/08/25 RM: logol -- ROM; unmaintained package; low popcon Nilesh Patra
2023/08/24 Re: Volunteer for Debian med Andreas Tille
2023/08/22 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree Étienne Mollier
2023/08/18 Re: Bug filled against an old version of a package Sébastien Jodogne
2023/08/18 Re: Bug filled against an old version of a package Joost van Baal-Ilić
2023/08/18 Bug filled against an old version of a package Sébastien Jodogne
2023/08/17 Re: provean: incompatible with cd-hit >= 4.8.1-4 Andreas Tille
2023/08/17 Re: pyensembl autopkgtest Andreas Tille
2023/08/17 Re: pyensembl autopkgtest Lin Qigang
2023/08/16 Re: pyensembl autopkgtest Andreas Tille
2023/08/15 Re: pyensembl autopkgtest Lin Qigang
2023/08/13 Bug#1046633: ITP: libleidenalg -- implementation of the Leiden algorithm in C++ Étienne Mollier
2023/08/11 Re: pyensembl autopkgtest Andreas Tille
2023/07/31 Aw: GENtle - some progress Steffen Möller
2023/07/31 GENtle - some progress Steffen Möller
2023/07/30 Bug#1042574: RM: theano, keras, deepnano -- RoM (theano), broken by numpy 1.24, theano mostly abandoned upstream Rebecca N. Palmer
2023/07/28 New CamiTK 5.1.0 release Emmanuel Promayon
2023/07/28 Re: Request for Sponsorship: VeryFastTree - Parallelized and Optimized Version of FastTree César Pomar
2023/07/23 Proposed RM: theano, keras, deepnano -- broken by numpy 1.24, theano mostly abandoned upstream Rebecca N. Palmer
2023/07/23 Dependency of Debian-Med packages on Apache2 web server Tony Travis
2023/07/20 Bug#1041485: RFS: spades/3.15.5+dfsg-2.1 [NMU] [RC] -- genome assembler for single-cell and isolates data sets Bo YU
2023/07/20 Re: Bug#1041485: RFS: spades/3.15.5+dfsg-2.1 [NMU] [RC] -- genome assembler for single-cell and isolates data sets Andreas Tille
2023/07/19 Bug#1041485: RFS: spades/3.15.5+dfsg-2.1 [NMU] [RC] -- genome assembler for single-cell and isolates data sets Bo YU
2023/07/19 Bug#1041485: RFS: spades/3.15.5+dfsg-2.1 [NMU] [RC] -- genome assembler for single-cell and isolates data sets Étienne Mollier
2023/07/19 Re: [Help] Could someone please have a look at gmap build failure César Pomar
2023/07/19 Re: Bug#1040566: let logol be removed Andreas Tille
2023/07/19 Re: [Help] Could someone please have a look at gmap build failure Michael R. Crusoe
2023/07/18 Re: Bug#1040566: let logol be removed olivier sallou
2023/07/18 Re: Bug#1040566: let logol be removed Andreas Tille
2023/07/17 Re: [Help] Could someone please have a look at gmap build failure César Pomar
2023/07/16 Re: What is the point of B-D-I in a package that has no arch:any component? Nilesh Patra
2023/07/16 Re: What is the point of B-D-I in a package that has no arch:any component? Andreas Tille
2023/07/16 Re: Fwd: civetweb_1.15+dfsg-5_source.changes REJECTED Andreas Tille
2023/07/16 Re: GATK Pierre Gruet
2023/07/16 Re: Fwd: civetweb_1.15+dfsg-5_source.changes REJECTED Sébastien Jodogne
2023/07/16 Re: Fwd: civetweb_1.15+dfsg-5_source.changes REJECTED Sébastien Jodogne
2023/07/16 What is the point of B-D-I in a package that has no arch:any component? Nilesh Patra