Le Wed, Aug 29, 2007 at 10:49:15AM +0900, Charles Plessy a écrit : > Package: wnpp > Severity: wishlist > Owner: Charles Plessy <[EMAIL PROTECTED]> > > Package name : ngila > . > Ngila implements the Miller and Myers (1988) algorithm in order to > find a least costly global alignment of two sequences given homology > costs and a gap cost. Two versions of the algorithm are > included: holistic and divide-and-conquer. The former is faster but > the latter utilizes less memory. Ngila starts with the > divide-and-conquer method but switches to the holistic method for > subsequences smaller than a user-established threshold. This improves > its speed without substantially increasing memory requirements. Ngila > also allows users to assign costs to end gaps that are smaller than > costs for internal gaps. This is important for aligning using the > free-end-gap method. > . > Ngila is published in Cartwright RA Bioinformatics 2007 > 23(11):1427-1428; doi:10.1093/bioinformatics/btm095
Hi all, I just realised that I made many package descriptions by cut-and-paste from published articles, and I wonder if it is a fair use or a copyright infringement ? Have a nice day, -- Charles Plessy http://charles.plessy.org Wako, Saitama, Japan -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
