On 07/22/2010 03:10 AM, Charles Plessy wrote: > Le Tue, Jul 20, 2010 at 06:05:11AM +0000, Sri Girish Srinivasa Murthy a écrit > : > >> I am graduate student in Luebeck, where Steffen is also located, and mostly >> working in the (almost) neighbouring Max Planck Institute to study >> Microbioata in Skin and Gut of Mouse. As an Ubuntian I joined Debian Med two >> weeks or so ago and with Steffen I have done some packaging with the help of >> Steffen (denoiser,python-cogent, python-pynast, qiime, mothur), an upload >> only pending the confirmation of upstream that this is ok to redistribute >> from the respective Authors but they somehow seem to be all on vacation. >> >> I have strong interest to learn more about cloud computing and use it for NG >> sequencing and the data analysis. Steffen set up a server for this that I am >> going to share. Whoever on this list feels like discussing along, please drop >> me a quick Hello. >> > welcome in Debian Med, and many thanks for your help to increase our support > for high-throughput sequencing applications. Our packages are listed on our > ‘web sentinel’ pages, but this does not indicate much how they fit together. > Do not hesitate to document on the Debian wiki how the packages you added can > be used as part of the same workflow. Also, we have an area on the main > website, that may be used as well—perhaps after a drafting phase on the wiki. > These pages are translated in many languages, so they are more suited for > non-specialists. > > - The web sentinels: http://debian-med.alioth.debian.org/tasks/ > - The Debian wiki: http://wiki.debian.org/DebianMed > - The Debian website: http://www.debian.org/devel/debian-med/ > > Have a nice day, > When the project(s) are going we should start thinking about some fancy google-cookies on wiki.debian.org that summarize how to assemble working environment for various aspects of NG sequencing. Besides an overview section I am thinking about a smallish howto-like description of workflows with Debian packages, eventually with a link to myExperiment.org. Such things only we as a community could possibly come up with - and I think we should.
Many greetings Steffen -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected] Archive: http://lists.debian.org/[email protected]
