Hi Steffen, > we have qiime in experimental because of pynast from what I recall. > I have not moved that into non-free/sid.
I'd forgotten about PyNAST. I can't see any licensing reason why it can't go into Sid. I've had a play with it just now and have the following comments: - The package should probably be called simply "pynast" as it's primarily an application written in Python not a Python module. - On Lucid I have to change "--with python2" to "--with python-support" to build but as far as I can see the result is identical. In either case we can drop the build dependency on python-central. - In the docs directory the .buildinfo file can be excluded. - Also in docs the .js files should not be compressed and the jquery.js.gz file can be symlinked as per Lintian warning, with dependency on libjs-jquery. I committed the relevant changes to SVN just now. > Are you on the commit list? You'd need to like what I did. I've never touched it before today, and the only requirement for Qiime is that the 'pynast' binary is in the path and is functional, so really whatever you do I'll be happy. I've gone ahead and renamed the binary package as noted above but not yet the source package, so it's up to you to rename the source too or else revert the name to python-pynast if you think I'm mistaken. I'm not fussed either way. > I'd feel like separating the documentation into python-pynast-doc. > It is not so large and the tool is not used in constrained > environments ... well, clouds, maybe ... Maybe, but anyone assembling HT sequence isn't going to care about saving 120K of space so I think there may be better uses for your time ;-) Cheers, TIM -- Tim Booth <[email protected]> NERC Environmental Bioinformatics Centre Centre for Ecology and Hydrology Maclean Bldg, Benson Lane Crowmarsh Gifford Wallingford, England OX10 8BB http://nebc.nerc.ac.uk +44 1491 69 2705 -- This message (and any attachments) is for the recipient only. NERC is subject to the Freedom of Information Act 2000 and the contents of this email and any reply you make may be disclosed by NERC unless it is exempt from release under the Act. Any material supplied to NERC may be stored in an electronic records management system. -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected] Archive: http://lists.debian.org/1314355273.3730.8530.camel@barsukas
