On 12/11/2011 04:52 AM, Charles Plessy wrote: > Le Sun, Dec 11, 2011 at 12:07:46AM +0900, Charles Plessy a écrit : > >> It is a bit late so I will not upload this night, but if nobody sends a patch >> until tomorrow morning, I will upload the package as it is. Let's ask >> Upstream >> to replace locfit, which is also the cause for cufflinks to be non-free, and >> turn the dpkg-buildflags on later. >> > Good morning :) > > Hi Charles , > I uploaded cufflinks, after turning on xz compression for the binary package > as > it saves half of the space. > > Nice , good to know ! > For the packages I maintain in Git, I usually store the build logs in a > special > branch (http://charles.plessy.org/Debian/debiâneries/tout-dans-git). Would > you > like me to do so for cufflinks ? I am currently exploring on off-line > packages > if it is practical to have each architecture log in a separate branch, for > easier comparisons. Can I try this with cufflinks as well ? > Sure , please do as you like . > Next step, apart from contacting cufflinks authors about locfit, is probably > to > package Tophat for having the full toolchain. I see a package in Carlos J > Borroto's personal package archive on Launchpad. There is probably a good > synergy > to have there (and samtools/bam.h patches to share ?). > > https://launchpad.net/~cjav/+archive/biotools/+packages > I'll have a look on tophat this week . About locfit , it seems to be quite popular algorithm and to be honest I don't believe that upstream will change it . But I'll try to get in touch with authors .
> Have a nice Sunday, > > Have a nice Monday ! Alex -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected] Archive: http://lists.debian.org/[email protected]
