I could go a little futher. I think you also need jarpack,netlib-java and jlapack. I could generate jarpack and netlib-java stuff (not packaged yet, from source), but I cannot find anywhere jlapack source. For jlapack, there are only binaries and no instructions on how to generate those. I sent a mail upstream to have information, I will let you know.
Olivier Le 3/21/12 3:54 PM, Olivier Sallou a écrit : > > Le 3/7/12 10:00 AM, Andreas Tille a écrit : >> [Shamelessly quoting you on list because no private content and a >> public explanetion seems to make sense.] >> Hi Olivier, >> >> thanks for pushing me! :-) >> >> On Wed, Mar 07, 2012 at 09:26:23AM +0100, Olivier Sallou wrote: >>> Hi Andreas, >>> could you validate j2f package with the package you were preparing >>> (don't remember the name) ? >> Finally it was the last unpackaged precondition for beast-mcmc package >> and I injected my current packaging status now in SVN: >> >> svn://svn.debian.org/debian-med/trunk/packages/libmtj-java/trunk >> >> I've got some build result with the following patch: >> >> $ diff -u build.xml.orig build.xml >> --- build.xml.orig 2011-04-22 23:43:26.000000000 +0200 >> +++ build.xml 2012-01-23 16:08:21.000000000 +0100 >> @@ -16,4 +16,6 @@ >> <zipfileset dir="." >> excludes="**/lib/nblibraries-private.properties **/nbproject/private** >> **/.ant-targets-build.xml dist/** build/** **/*.zip **/.svn**" >> prefix="mtj-${version}" /> >> </zip> >> </target> >> + <property name="src.dir" value="src"/> >> + <property name="javac.classpath" >> value="/usr/share/java/junit.jar:lib/netlib-java/netlib-java-0.9.3.jar:lib/netlib-java/arpack_combo-0.1.jar"/> >> </project> > After installing f2j package, and setting /usr/share/java/f2jutil.jar > instead of lib/netlib-java/netlib-java-0.9.3.jar , we have lots of > compil errors less. > Remaining errors are with arpack_combo I think. I do not know how to > generate it, I gonna have a look. > > Olivier > >>> If yes I will upload it, else I will wait... >> The problem is that I can't say. We somehow need to reproduce the JARs >> in lib/netlib-java which somehow can be approached using f2j but I >> somehow lost track how this could be done. So my answer to your >> question is: may be. If you find a way to reproduce working the two >> jars in lib/netlib-java I'd be more than thankful. >> >> Kind regards >> >> Andreas. >> -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/4f6a00eb.8020...@irisa.fr