Package: wnpp Severity: wishlist Owner: Sascha Steinbiss <[email protected]>
* Package name : tantan Version : 13 Upstream Author : Martin Frith <[email protected]> * URL : http://www.cbrc.jp/tantan/ * License : GPL Programming Lang: C Description : low complexity and tandem repeat masker for biosequences tantan is a tool to mask simple regions (low complexity and short-period tandem repeats) in DNA, RNA, and protein sequences. The aim of tantan is to prevent false predictions when searching for homologous regions between two sequences. Simple repeats often align strongly to each other, causing false homology predictions. This tool is very useful in conjunction with fast aligners like LAST. See http://www.ncbi.nlm.nih.gov/pubmed/25172925 for a good use case example. The tantan package will be maintained by the Debian Med Packaging Team. -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected] Archive: https://lists.debian.org/[email protected]
