On Tue, Sep 13, 2016 at 10:26 AM, Andreas Tille <[email protected]> wrote:
> Status update. > > On Mon, Aug 22, 2016 at 05:42:26PM +0200, Michael Crusoe wrote: > > > I'm at the H3Abionet Cloud computing hackathon this week in Pretoria, > > > South Africa. > > > > > > http://www.h3abionet.org/training-and-education/h3abionet-courses/17- > > > h3abionet-courses/h3abionet-courses-upcoming/266- > > > h3abionet-cloud-computing-hackathon > > > > > > The resulting CWL tools and workflow descriptions will be contributed > in > > > real time to the community repository: https://github. > > > com/common-workflow-language/workflows > > > > > > It would be super nice if I could get assistance making Debian > packages of > > > the following so we don't abuse Docker as a package manager :-) > > > > > > metagenomeSeq https://bioconductor.org/packages/release/bioc/html/ > > > metagenomeSeq.html > > In new since 3 weeks - so might be available soon. > > > > phloseq https://github.com/joey711/phyloseq > > In new since some hours - so will be available at some point in time. > Thanks! > > > bamstats http://bamstats.sourceforge.net/ > > Another Java beast with included JARs. In contrast to snpeff its not on > my personal agenda so I'm not sure whether I can help here. I guess it > does not make a lot of work once it is packaged since there are no > recent changes visible in this project. Understood, people in that community seem to like it though. > Kind regards > > Andreas. > > -- > http://fam-tille.de > > -- Michael R. Crusoe Community Engineer & Co-founder Common Workflow Language project https://impactstory.org/u/0000-0002-2961-9670 [email protected] +40 720 781 765 +1 480 627 9108
