On 24 July 2017 at 06:12, Afif Elghraoui <[email protected]> wrote: > I was under the impression that htslib 1.5, required for bcftools 1.5, > has a soname bump. There is no pysam release yet to wrap htslib 1.5, so > I think upgrading bcftools/samtools/htslib right now to 1.5 will just > make it impossible to use pysam until a new release comes out, right?
Also, the htslib 1.4.1 is almost complete at 85%. https://release.debian.org/transitions/html/auto-htslib.html I think it would be better to finish that transition before starting another one, otherwise some packages may get auto-removed from testing.
