On 25.10.17 10:56, Michael Crusoe wrote: > Sorry, I missed the bit where we are deprecating RRID. Can someone > explain?
Because of https://arxiv.org/ftp/arxiv/papers/1707/1707.03659.pdf and some web googling from which I gathered that the "Research Resource IDentifiers" are not only provided by SciCrunch. Admittedly, I fail to find that page now that I want to find it :o/ Personally, I could not care less, let those catalog providers fight that out among themselves. However, I find that the notion of SciCrunch clearly identifies the provenance of that information, while "RRID" to me is more of a concept coined by (https://www.force11.org), not a provider. And with several initiatives following the same purpose, I found that by using SciCrunch not RRID, we would be the most provider-neutral. And then again, it is only something local to the Debian packaging, not publicly visible, so nobody should truly care and the use of SciCrunch imho serves us best on a technical level. The https://www.force2017.org/ starts today in Berlin which should gather people who know best - is anybody following this list attending? Steffen > > 2017-10-22 14:34 GMT+03:00 Steffen Möller <[email protected] > <mailto:[email protected]>>: > > Args, I have only now updated > > https://wiki.debian.org/UpstreamMetadata > <https://wiki.debian.org/UpstreamMetadata> > > to reference SciCrunch by their name. > > Many thanks and sorry > > Steffen > > On 22.10.17 12:20, Andreas Tille wrote: > > Hi Charles, > > > > wasn't Steffen just doing heaps of uploads with > > > > - - Name: RRID > > + - Name: SciCrunch > > > > As far as I understood we now are deprecating RRID. Should the > > UDD importer warn about this? > > > > Kind regards > > > > ANdreas. > > > > On Sun, Oct 22, 2017 at 08:20:50AM +0000, Charles Plessy wrote: > >> This is an automated email from the git hooks/post-receive script. > >> > >> plessy pushed a commit to branch master > >> in repository libtfbs-perl. > >> > >> commit b070d2137c24b20e577107ae6b5bda6ef78e9800 > >> Author: Charles Plessy <[email protected] > <mailto:[email protected]>> > >> Date: Sun Oct 22 17:20:06 2017 +0900 > >> > >> Update metadata; add SciCrunch ID. > >> --- > >> debian/upstream/metadata | 8 +++++--- > >> 1 file changed, 5 insertions(+), 3 deletions(-) > >> > >> diff --git a/debian/upstream/metadata b/debian/upstream/metadata > >> index 5c3740b..900ee5a 100644 > >> --- a/debian/upstream/metadata > >> +++ b/debian/upstream/metadata > >> @@ -1,4 +1,4 @@ > >> -Contact: Boris.Lenhard at bccs.uib.no <http://bccs.uib.no> > >> +Contact: b.lenhard at imperial.ac.uk <http://imperial.ac.uk> > >> Homepage: http://tfbs.genereg.net/ > >> Name: TFBS > >> Reference: > >> @@ -12,6 +12,8 @@ Reference: > >> Number: 8 > >> Pages: 1135-1136 > >> Year: 2002 > >> - URL: > http://bioinformatics.oxfordjournals.org/cgi/content/abstract/18/8/1135 > <http://bioinformatics.oxfordjournals.org/cgi/content/abstract/18/8/1135> > >> + URL: > https://github.com/ComputationalRegulatoryGenomicsICL/TFBS.git > <https://github.com/ComputationalRegulatoryGenomicsICL/TFBS.git> > >> Repository: http://www.ii.uib.no/svn/lenhard/TFBS/ > <http://www.ii.uib.no/svn/lenhard/TFBS/> > >> -Watch: http://tfbs.genereg.net/TFBS-(.*)\.tar\.gz > <http://tfbs.genereg.net/TFBS-(.*)\.tar\.gz> > >> +Registry: > >> + - Name: RRID > >> + Entry: SCR_015774 > >> > >> -- > >> Alioth's /usr/local/bin/git-commit-notice on > /srv/git.debian.org/git/debian-med/libtfbs-perl.git > <http://git.debian.org/git/debian-med/libtfbs-perl.git> > >> > >> _______________________________________________ > >> debian-med-commit mailing list > >> [email protected] > <mailto:[email protected]> > >> > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit > > <http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit> > >> > > > > > -- > Michael R. Crusoe > Co-founder & Lead, > Common Workflow Language project <http://www.commonwl.org/> > https://impactstory.org/u/0000-0002-2961-9670 > [email protected] <mailto:[email protected]> > +1 480 627 9108
