Hi folks, I've reported two issues to the two seqlibs:
https://github.com/walaj/SeqLib/issues/56 (this is packaged as libseqlib) https://github.com/isovic/seqlib/issues/2 (this is needed by some COVID-19 relevant dependencies) In case I do not get any answer from upstreams quickly any hint how we want to name the second project would be welcome. As another data point conda seems to deal with the first one only: /bioconda-recipes(master) $ grep -Riw seqlib recipes/bxtools/build.sh:rm -rf SeqLib recipes/bxtools/build.sh:git clone --recursive https://github.com/walaj/SeqLib recipes/bxtools/build.sh:cd SeqLib recipes/rna-seqc/build.sh:pushd SeqLib/bwa recipes/rna-seqc/build.sh:pushd SeqLib/fermi-lite recipes/rna-seqc/build.sh:pushd SeqLib/htslib recipes/rna-seqc/build.sh: SeqLib/lib/libseqlib.a recipes/freebayes/build.sh:sed -i.bak 's/^CC.*//g' SeqLib/htslib/Makefile recipes/freebayes/build.sh:sed -i.bak 's/^CC.*//g' SeqLib/bwa/Makefile recipes/freebayes/build.sh:sed -i.bak 's/^CC.*//g' SeqLib/fermi-lite/Makefile It was packaged in connection with freebayes in Debian as well. Comments are welcome. Kind regards Andreas. -- http://fam-tille.de
