Hi Steffen, On Wed, Jun 24, 2020 at 07:15:50PM +0200, Steffen Möller wrote: > This needs a bit of a JavaScript clean-up
Yep: E: quast source: source-is-missing quast_libs/html_saver/static/bootstrap/bootstrap-tooltip-5px-lower.min.js E: quast source: source-is-missing quast_libs/html_saver/static/bootstrap/bootstrap.min.js E: quast source: source-is-missing quast_libs/html_saver/static/flot/jquery.flot.js line length is 2964 characters (>512) E: quast source: source-is-missing quast_libs/html_saver/static/flot/jquery.flot.navigate.js line length is 1984 characters (>512) E: quast source: source-is-missing quast_libs/html_saver/static/flot/jquery.flot.pie.js line length is 259 characters (>256) E: quast source: source-is-missing quast_libs/html_saver/static/flot/jquery.flot.resize.js line length is 863 characters (>512) E: quast source: source-is-missing quast_libs/html_saver/static/ie_html5.js line length is 2252 characters (>512) E: quast source: source-is-missing quast_libs/html_saver/static/jquery-1.7.2.min.js W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/flot/excanvas.js please use libjs-excanvas W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/flot/excanvas.min.js please use libjs-excanvas W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/flot/jquery.js please use libjs-jquery W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/flot/jquery.min.js please use libjs-jquery W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/jquery-1.7.2.min.js please use libjs-jquery W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/jquery-1.8.2.js please use libjs-jquery W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/jquery-1.8.2.min.js please use libjs-jquery W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/jquery-ui.js please use libjs-jquery-ui W: quast: embedded-javascript-library usr/lib/python3/dist-packages/quast_libs/html_saver/static/jquery.css please use libjs-jquery > and the tests are not testing right. I think I have solved this. :-) > I had continued where Andreas has suspended his removal of foreign code > and binaries from the upstream code base. This was more than just > cosmetics because of rather crude license violations as with > https://github.com/ablab/quast/blob/master/quast_libs/genemark/linux_64/LICENSE > , which renders this even non-redistributable. Very cool if quast can be used sensibly even without these executables. Remark: Genemark itself needs tandemrepeatfinder where upstream promised to get it freed soon. Once this is done we can nag genemark authors. :-P > My understanding is that augustus can to some degree compensate for the > non-availability of genemark, but this has to be seen. I have to leave this question to the competence of you and the readers here. > Whoever feels like it, please continue with the packaging. ... which for the moment means getting rid of the minimized JS. Any volunteer would be really welcome. Kind regards Andreas. -- http://fam-tille.de
