@Andreas, good news: I made quite some inroads on why pigx-rnaseq does not work. But that is for another email.
My current hurdle is that vfs_fonts.js is missed by pandoc: pandoc: /usr/lib/R/site-library/DT/htmlwidgets/lib/datatables-extensions/Buttons/js/vfs_fonts.js: openBinaryFile: does not exist (No such file or directory) This file should have been located next to pdfmake in /usr/share/javascript/jquery-datatables-extensions/pdfmake/build but Files-Excluded: */buttons.flash* */*.swf */vfs_fonts.js does not want that. There are suggestions on https://stackoverflow.com/questions/48835055/pdfmake-cant-find-the-font-files-on-vfs to create one's own variant, but this should then happen within that JavaScript package, right? Best, Steffen
