You need an update of https://github.com/samtools/htslib/search?q=BCF_SR_ALLOW_NO_IDX
see https://github.com/samtools/htslib/pull/1089 Best, Steffen On 01.10.20 13:44, Andreas Tille wrote: > Hi, > > I updated bcftools in Git but when trying to build I get > > ... > vcfmerge.c: In function 'main_vcfmerge': > vcfmerge.c:3213:36: error: 'BCF_SR_ALLOW_NO_IDX' undeclared (first use in > this function) > 3213 | bcf_sr_set_opt(args->files,BCF_SR_ALLOW_NO_IDX); > | ^~~~~~~~~~~~~~~~~~~ > vcfmerge.c:3213:36: note: each undeclared identifier is reported only once > for each function it appears in > > > Any volunteer to tackle this? > > Kind regards > > Andreas. > >
