Hi Andreas, My laptop has decided to die last week, so I can do only minor edits through the salsa web interface.
Le ven. 4 déc. 2020 à 23:58, Andreas Tille <[email protected]> a écrit : > > I updated the packaging of optimir in Git[1] but its autopkgtest > fails with > > > Starting Library preparation... > Error with system call: Bowtie2 index creation failed: command line = > bowtie2-build -f > /tmp/autopkgtest.FxuHx2/autopkgtest_tmp/OptimiR_Results_Dir/OptimiR_lib/fasta/optimiR_library.fa > > /tmp/autopkgtest.FxuHx2/autopkgtest_tmp/OptimiR_Results_Dir/OptimiR_lib/bowtie2_index/optimiR_alignment_library > -q The autopkgtest seems to be successful with salsa-ci: https://salsa.debian.org/med-team/optimir/-/pipelines/203997 Is it possible that the error is transitional? Best, Dylan
